RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 FZR1Q9UM11 496 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 HEATR1Q9H583 2144 aaKnown RBP15.67■□□□□ 0.1
TSPAN4-212ENST00000494815 FAM221AA4D161 298 aa15.67■□□□□ 0.1
TSPAN4-212ENST00000494815 IFNA2P01563 188 aa15.67■□□□□ 0.1
TSPAN4-212ENST00000494815 RPS23P62266 143 aaKnown RBP15.67■□□□□ 0.1
TSPAN4-212ENST00000494815 IAH1Q2TAA2 248 aaPredicted RBP15.67■□□□□ 0.1
TSPAN4-212ENST00000494815 Q6ZR03 302 aa15.67■□□□□ 0.1
TSPAN4-212ENST00000494815 RIMS4Q9H426 269 aaPredicted RBP15.67■□□□□ 0.1
TSPAN4-212ENST00000494815 TUBA4BQ9H853 241 aa15.67■□□□□ 0.1
TSPAN4-212ENST00000494815 DECR2Q9NUI1 292 aa15.67■□□□□ 0.1
TSPAN4-212ENST00000494815 C14orf166Q9Y224 244 aaKnown RBP15.67■□□□□ 0.1
TSPAN4-212ENST00000494815 DEDDO75618 318 aa15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 GRPP07492 148 aa15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 FBP1P09467 338 aa15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 DUSP1P28562 367 aa15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 FCGR2CP31995 323 aa15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 RBMXP38159 391 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 SLC22A25Q6T423 547 aa15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 UNQ6494/PRO21346Q6UXR6 183 aa15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 TCEAL7Q9BRU2 100 aa15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 IGHV3-13P01766 116 aa15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 RNF224P0DH78 156 aa15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 AKR1C3P42330 323 aa15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 CASP6P55212 293 aa15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 Q6ZPA2 131 aa15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 COMMD1Q8N668 190 aa15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 SUMF2Q8NBJ7 301 aa15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 ZCCHC14Q8WYQ9 949 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 ZNF2Q9BSG1 426 aaPredicted RBP15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 METTL1Q9UBP6 276 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-212ENST00000494815 TRAV24A0A0B4J272 114 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 NXPH2O95156 264 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 KNG1P01042 644 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 AWAT1Q58HT5 328 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 SPIN3Q5JUX0 258 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 STX12Q86Y82 276 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 UBAC2Q8NBM4 344 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 NEK7Q8TDX7 302 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 MSL2Q9HCI7 577 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 CD40P25942 277 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 TMEM33P57088 247 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 ZNF146Q15072 292 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 Q6P435 159 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 C22orf34Q6ZV56 151 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 HES4Q9HCC6 221 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 Q9N2K0 584 aa15.65■□□□□ 0.1
TSPAN4-212ENST00000494815 CADP27708 2225 aa15.64■□□□□ 0.09
TSPAN4-212ENST00000494815 TRBV6-6A0A0A6YYG2 114 aa15.64■□□□□ 0.09
TSPAN4-212ENST00000494815 DEGS1O15121 323 aa15.64■□□□□ 0.09
TSPAN4-212ENST00000494815 TSPAN15O95858 294 aa15.64■□□□□ 0.09
TSPAN4-212ENST00000494815 SNCAP37840 140 aa15.64■□□□□ 0.09
TSPAN4-212ENST00000494815 KLF3P57682 345 aaPredicted RBP15.64■□□□□ 0.09
TSPAN4-212ENST00000494815 MSMPQ1L6U9 139 aa15.64■□□□□ 0.09
TSPAN4-212ENST00000494815 TMEM108Q6UXF1 575 aa15.64■□□□□ 0.09
TSPAN4-212ENST00000494815 C11orf53Q8IXP5 236 aa15.64■□□□□ 0.09
TSPAN4-212ENST00000494815 ST6GALNAC3Q8NDV1 305 aa15.64■□□□□ 0.09
TSPAN4-212ENST00000494815 TMEM171Q8WVE6 324 aa15.64■□□□□ 0.09
TSPAN4-212ENST00000494815 FAM212BQ9NTI7 297 aaPredicted RBP15.64■□□□□ 0.09
TSPAN4-212ENST00000494815 CHD8Q9HCK8 2581 aa15.64■□□□□ 0.09
TSPAN4-212ENST00000494815 POLEQ07864 2286 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 IGLV3-9A0A075B6K5 115 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 A0A1W2PPE3 182 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 C7orf77A4D0Y5 90 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 SNRNP70P08621 437 aaKnown RBP15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 ARV1Q9H2C2 271 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 PLEKHA2Q9HB19 425 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 TREM2Q9NZC2 230 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 DUSP13Q9UII6 198 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 TRGV8A0A0C4DH27 118 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 KIR2DS1A0A191URI9 304 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 HSPB6O14558 160 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 MDH2P40926 338 aaKnown RBP15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 GLP1RP43220 463 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 KIR2DS4P43632 304 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 FABP9Q0Z7S8 132 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 KIR2DS1Q14954 304 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 MIDNQ504T8 468 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 RDH5Q92781 318 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 SCRT1Q9BWW7 348 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 SMIM3Q9BZL3 60 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 CACNA1AO00555 2505 aa15.63■□□□□ 0.09
TSPAN4-212ENST00000494815 A6NLC8 198 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 ZNF729A6NN14 1252 aaPredicted RBP15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 HS3ST1O14792 307 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 IFNA21P01568 189 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 CD200P41217 278 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 CA7P43166 264 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 GUK1Q16774 197 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 SGPP2Q8IWX5 399 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 NUP37Q8NFH4 326 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 PRORYQ9H606 182 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 IGHV3-64DA0A0J9YX35 117 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 A0A1W2PPH5 198 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 SH2D1BO14796 132 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 PTBP3O95758 552 aaKnown RBP15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 IGHV2-5P01817 119 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 CTSDP07339 412 aaPredicted RBP15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 SFTPCP11686 197 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 GPX4P36969 197 aaPredicted RBP15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 WDR82Q6UXN9 313 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms