RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 RAB36O95755 333 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 IGHV3-48P01763 117 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 GYPBP06028 91 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 ADRA2AP08913 450 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 LIMS3P0CW19 117 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 LIMS4P0CW20 117 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 PGA4P0DJD7 388 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 PGA3P0DJD8 388 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 OR8G3PP0DMU2 310 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 NR2C1P13056 603 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 CTLA4P16410 223 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 MYL12AP19105 171 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 KLK2P20151 261 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 PSMB1P20618 241 aaKnown RBP2.95□□□□□ -1.94
PTCD3-216ENST00000487043 PYCR1P32322 319 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 MAP2K4P45985 399 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 ETV1P50549 477 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF133P52736 654 aaPredicted RBP2.95□□□□□ -1.94
PTCD3-216ENST00000487043 ACTC1P68032 377 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 ACTA1P68133 377 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 EGFEM1PQ0D2K5 195 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 GGTLC2Q14390 218 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 TEX30Q5JUR7 227 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 SYT6Q5T7P8 510 aaPredicted RBP2.95□□□□□ -1.94
PTCD3-216ENST00000487043 UBE2UQ5VVX9 321 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 C11orf71Q6IPW1 123 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 DNM1P34Q6PK57 102 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 SLC25A48Q6ZT89 311 aaKnown RBP2.95□□□□□ -1.94
PTCD3-216ENST00000487043 HDDC2Q7Z4H3 204 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF546Q86UE3 836 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 CDC20BQ86Y33 519 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 WDFY1Q8IWB7 410 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 ACBD7Q8N6N7 88 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 PROKR2Q8NFJ6 384 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 BPIFCQ8NFQ6 507 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 OR4C5Q8NGB2 326 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 OR4F15Q8NGB8 312 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 OR51L1Q8NGJ5 315 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 OR9Q1Q8NGQ5 310 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 OR2G2Q8NGZ5 317 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 OR2T27Q8NH04 317 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 RORBQ92753 470 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 TMEM54Q969K7 222 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 TMIGD2Q96BF3 282 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 HIST1H4GQ99525 98 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 EMC6Q9BV81 110 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 RACGAP1Q9H0H5 632 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 SYT4Q9H2B2 425 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 ISYNA1Q9NPH2 558 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 RHBDL2Q9NX52 303 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 MED29Q9NX70 200 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 GLTPQ9NZD2 209 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 CLEC2DQ9UHP7 191 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 MCTS1Q9ULC4 181 aaKnown RBP2.95□□□□□ -1.94
PTCD3-216ENST00000487043 ERGIC3Q9Y282 383 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 TP53TG5Q9Y2B4 290 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 MED12Q93074 2177 aa2.95□□□□□ -1.94
PTCD3-216ENST00000487043 NCOR2Q9Y618 2525 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 FREM2Q5SZK8 3169 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 ALPK2Q86TB3 2170 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 IGKV1D-43A0A0B4J1Z2 117 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 KIR2DL5BA0A0G2JN68 375 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 KIR2DL5BA0A0G2JPC4 375 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 A0A1W2PQL4 384 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-216ENST00000487043 DAPL1A0PJW8 107 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 TVP23AA6NH52 213 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 C12orf71A8MTZ7 269 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF670-ZNF695F2Z2N8 137 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 H3BSA7 217 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 TEX46H3BTG2 121 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 H7C1C5 153 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF593O00488 134 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-216ENST00000487043 CCL21O00585 134 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 PHYHO14832 338 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 MYL12BO14950 172 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 RAB29O14966 203 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 MRPL33O75394 65 aaKnown RBP2.94□□□□□ -1.94
PTCD3-216ENST00000487043 AQP8O94778 261 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 SNAPINO95295 136 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 TGM6O95932 706 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 PTHP01270 115 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 HSPB1P04792 205 aaKnown RBP2.94□□□□□ -1.94
PTCD3-216ENST00000487043 MRPL3P09001 348 aaKnown RBP2.94□□□□□ -1.94
PTCD3-216ENST00000487043 STAG3L3P0CL85 134 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 TBPP20226 339 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 ALOX5APP20292 161 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 KIR2DS4P43632 304 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 VDAC2P45880 294 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-216ENST00000487043 CSNK1A1P48729 337 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 HCCSP53701 268 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 WNT4P56705 351 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 LCN6P62502 163 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF45Q02386 682 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 GLO1Q04760 184 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 FMODQ06828 376 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 MLLT11Q13015 90 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-216ENST00000487043 TPBGQ13641 420 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 STK11Q15831 433 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 NEDD8Q15843 81 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF829Q3KNS6 432 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms