RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 CDRT1O95170 752 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 CELP19835 753 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 SERPINA2P20848 420 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 FUT3P21217 361 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 HSPA13P48723 471 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 PSMD7P51665 324 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 SLC35B1P78383 322 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 TRAM1Q15629 374 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 PIGYQ3MUY2 71 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 ATAD3CQ5T2N8 411 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 GLT8D1Q68CQ7 371 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 AWAT2Q6E213 333 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 GLIPR1L1Q6UWM5 242 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 CCBE1Q6UXH8 406 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-215ENST00000484203 ZNF497Q6ZNH5 498 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 TMEM219Q86XT9 240 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 LINC00311Q8N616 119 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 NANOGP1Q8N7R0 232 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 ZNF485Q8NCK3 441 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 BPIFB6Q8NFQ5 453 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 OR5AU1Q8NGC0 362 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 OR13A1Q8NGR1 328 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 MRGPRDQ8TDS7 321 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 CHPT1Q8WUD6 406 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 RGP1Q92546 391 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-215ENST00000484203 TFAP2CQ92754 450 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 ARL11Q969Q4 196 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 R3HDM4Q96D70 268 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 PGLYRP3Q96LB9 341 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 GHITMQ9H3K2 345 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 RIMS4Q9H426 269 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-215ENST00000484203 ZNF286AQ9HBT8 521 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 KCNIP1Q9NZI2 227 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 RCC2Q9P258 522 aaKnown RBP4.92□□□□□ -1.62
PTCD3-215ENST00000484203 CLEC2DQ9UHP7 191 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 TRAPPC2LQ9UL33 140 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 MGAT4AQ9UM21 535 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 PSG11Q9UQ72 335 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 MRPS28Q9Y2Q9 187 aaKnown RBP4.92□□□□□ -1.62
PTCD3-215ENST00000484203 SIGLEC9Q9Y336 463 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 TPRKBQ9Y3C4 175 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 TSSC4Q9Y5U2 329 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-215ENST00000484203 TCRBV4S1A1TA0A5B7 111 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 MEX3AA1L020 520 aaKnown RBP4.91□□□□□ -1.62
PTCD3-215ENST00000484203 H0YHG0 523 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 SDCBPO00560 298 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-215ENST00000484203 HSD17B6O14756 317 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 GEMIN2O14893 280 aaKnown RBP4.91□□□□□ -1.62
PTCD3-215ENST00000484203 KCNAB3O43448 404 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 ARL6IP5O75915 188 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 MT-ND4P03905 459 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 PF4V1P10720 104 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 TMEM11P17152 192 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 CD1BP29016 333 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 RPS11P62280 158 aaKnown RBP eCLIP4.91□□□□□ -1.62
PTCD3-215ENST00000484203 BLCAPP62952 87 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 ZNF816Q0VGE8 651 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-215ENST00000484203 HES1Q14469 280 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 HABP2Q14520 560 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-215ENST00000484203 SPHARQ15513 63 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 ABCA11PQ4W5N1 156 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 LDLRAD2Q5SZI1 272 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 KPRPQ5T749 579 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-215ENST00000484203 XAF1Q6GPH4 301 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 RAB12Q6IQ22 244 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 AHSA2Q719I0 299 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 FOXRED2Q8IWF2 684 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 WFDC9Q8NEX5 89 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 OR51D1Q8NGF3 324 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 OR10K1Q8NGX5 313 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 OR2T10Q8NGZ9 312 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 RFESDQ8TAC1 157 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 IL17DQ8TAD2 202 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 KCNG3Q8TAE7 436 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 WIPF2Q8TF74 440 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-215ENST00000484203 NRG4Q8WWG1 115 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 NEDD4LQ96PU5 975 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 DERL3Q96Q80 235 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 CHCHD6Q9BRQ6 235 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 CENPOQ9BU64 300 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 PPIL3Q9H2H8 161 aaKnown RBP4.91□□□□□ -1.62
PTCD3-215ENST00000484203 ISYNA1Q9NPH2 558 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 ZFP57Q9NU63 452 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 FKBP14Q9NWM8 211 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 AURKAIP1Q9NWT8 199 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-215ENST00000484203 ETAA1Q9NY74 926 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 GNG12Q9UBI6 72 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 BLOC1S6Q9UL45 172 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 PEX16Q9Y5Y5 336 aa4.91□□□□□ -1.62
PTCD3-215ENST00000484203 SIRT4Q9Y6E7 314 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-215ENST00000484203 TRAV8-7A0A075B6U6 113 aa4.9□□□□□ -1.63
PTCD3-215ENST00000484203 PSMB11A5LHX3 300 aa4.9□□□□□ -1.63
PTCD3-215ENST00000484203 PTGES3LE9PB15 166 aa4.9□□□□□ -1.63
PTCD3-215ENST00000484203 AP4M1O00189 453 aa4.9□□□□□ -1.63
PTCD3-215ENST00000484203 PDCD6O75340 191 aa4.9□□□□□ -1.63
PTCD3-215ENST00000484203 CRTAPO75718 401 aaPredicted RBP4.9□□□□□ -1.63
PTCD3-215ENST00000484203 SC5DO75845 299 aa4.9□□□□□ -1.63
PTCD3-215ENST00000484203 MOSP00540 346 aa4.9□□□□□ -1.63
PTCD3-215ENST00000484203 LALBAP00709 142 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms