RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 C8orf31Q8N9H6 132 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 TSPAN14Q8NG11 270 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 OR52L2PQ8NGH6 319 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 OR56B4Q8NH76 319 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 PECRQ9BY49 303 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 GNG12Q9UBI6 72 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 RAB22AQ9UL26 194 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 HSF4Q9ULV5 492 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 HSD17B6O14756 317 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 RRP9O43818 475 aaKnown RBP15.15■□□□□ 0.02
PTCD3-210ENST00000473829 CLEC2LP0C7M8 214 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 REG1BP48304 166 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 ARHGDIBP52566 201 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 TMEM30BQ3MIR4 351 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 CT45A1Q5HYN5 189 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 SLC25A48Q6ZT89 311 aaKnown RBP15.15■□□□□ 0.02
PTCD3-210ENST00000473829 DRAM1Q8N682 238 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 OR56B1Q8NGI3 324 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 CT45A3Q8NHU0 189 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 ST6GALNAC6Q969X2 333 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 OCSTAMPQ9BR26 566 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 CENPOQ9BU64 300 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 ZNF696Q9H7X3 374 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 CHMP1AQ9HD42 196 aaPredicted RBP15.15■□□□□ 0.02
PTCD3-210ENST00000473829 OR2S2Q9NQN1 319 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 KCNIP1Q9NZI2 227 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 KCNK7Q9Y2U2 307 aa15.15■□□□□ 0.02
PTCD3-210ENST00000473829 A0A087WXM4 84 aa15.14■□□□□ 0.01
PTCD3-210ENST00000473829 LOC100506127A0A0U1RQW1 187 aa15.14■□□□□ 0.01
PTCD3-210ENST00000473829 FAM90A9PA6NNJ1 464 aa15.14■□□□□ 0.01
PTCD3-210ENST00000473829 NOTOA8MTQ0 251 aa15.14■□□□□ 0.01
PTCD3-210ENST00000473829 SDC2P34741 201 aa15.14■□□□□ 0.01
PTCD3-210ENST00000473829 PPP1CCP36873 323 aaKnown RBP15.14■□□□□ 0.01
PTCD3-210ENST00000473829 MNDAP41218 407 aa15.14■□□□□ 0.01
PTCD3-210ENST00000473829 BLCAPP62952 87 aa15.14■□□□□ 0.01
PTCD3-210ENST00000473829 ZNF816Q0VGE8 651 aaPredicted RBP15.14■□□□□ 0.01
PTCD3-210ENST00000473829 Q3ZCU0 254 aa15.14■□□□□ 0.01
PTCD3-210ENST00000473829 MORN2Q502X0 79 aa15.14■□□□□ 0.01
PTCD3-210ENST00000473829 Q6ZTK2 550 aa15.14■□□□□ 0.01
PTCD3-210ENST00000473829 Q8N2B8 174 aa15.14■□□□□ 0.01
PTCD3-210ENST00000473829 OR2T6Q8NHC8 308 aa15.14■□□□□ 0.01
PTCD3-210ENST00000473829 SETD6Q8TBK2 473 aa15.14■□□□□ 0.01
PTCD3-210ENST00000473829 RAB9BQ9NP90 201 aa15.14■□□□□ 0.01
PTCD3-210ENST00000473829 JPT1Q9UK76 154 aa15.14■□□□□ 0.01
PTCD3-210ENST00000473829 TRBV6-6A0A0A6YYG2 114 aa15.13■□□□□ 0.01
PTCD3-210ENST00000473829 TRIM64CA6NLI5 447 aa15.13■□□□□ 0.01
PTCD3-210ENST00000473829 SNRNP70P08621 437 aaKnown RBP15.13■□□□□ 0.01
PTCD3-210ENST00000473829 RAB6AP20340 208 aa15.13■□□□□ 0.01
PTCD3-210ENST00000473829 RAB7AP51149 207 aa15.13■□□□□ 0.01
PTCD3-210ENST00000473829 MXD1Q05195 221 aa15.13■□□□□ 0.01
PTCD3-210ENST00000473829 TPRA1Q86W33 373 aa15.13■□□□□ 0.01
PTCD3-210ENST00000473829 OR8H3Q8N146 312 aa15.13■□□□□ 0.01
PTCD3-210ENST00000473829 CAPSLQ8WWF8 208 aa15.13■□□□□ 0.01
PTCD3-210ENST00000473829 KCTD7Q96MP8 289 aa15.13■□□□□ 0.01
PTCD3-210ENST00000473829 SLC25A33Q9BSK2 321 aa15.13■□□□□ 0.01
PTCD3-210ENST00000473829 SERTAD4Q9NUC0 356 aa15.13■□□□□ 0.01
PTCD3-210ENST00000473829 IGHV1-3A0A0C4DH29 117 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 RAB27BO00194 218 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 OR2F2O95006 317 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 AMY1AP04745 511 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 AMY2AP04746 511 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 TGFBR1P36897 503 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 RANBP1P43487 201 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 HTD2P86397 168 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 TMEM95Q3KNT9 176 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 HIST2H2BDQ6DRA6 164 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 SFXN4Q6P4A7 337 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 MOB1BQ7L9L4 216 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 C16orf82Q7Z2V1 217 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 SGMS2Q8NHU3 365 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 GALMQ96C23 342 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 RBMXL1Q96E39 390 aaKnown RBP15.12■□□□□ 0.01
PTCD3-210ENST00000473829 YIPF6Q96EC8 236 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 RBM14Q96PK6 669 aaKnown RBP15.12■□□□□ 0.01
PTCD3-210ENST00000473829 C12orf4Q9NQ89 552 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 DAPK2Q9UIK4 370 aa15.12■□□□□ 0.01
PTCD3-210ENST00000473829 IGHV3-72A0A0B4J1Y9 119 aa15.11■□□□□ 0.01
PTCD3-210ENST00000473829 SH2D7A6NKC9 451 aaPredicted RBP15.11■□□□□ 0.01
PTCD3-210ENST00000473829 MFNGO00587 321 aa15.11■□□□□ 0.01
PTCD3-210ENST00000473829 GAPDHP04406 335 aaKnown RBP15.11■□□□□ 0.01
PTCD3-210ENST00000473829 SNRPBP14678 240 aaKnown RBP15.11■□□□□ 0.01
PTCD3-210ENST00000473829 ZNF137PP52743 207 aa15.11■□□□□ 0.01
PTCD3-210ENST00000473829 KLHDC1Q8N7A1 406 aa15.11■□□□□ 0.01
PTCD3-210ENST00000473829 OR10R2Q8NGX6 335 aa15.11■□□□□ 0.01
PTCD3-210ENST00000473829 RTN4IP1Q8WWV3 396 aaPredicted RBP15.11■□□□□ 0.01
PTCD3-210ENST00000473829 IL1F10Q8WWZ1 152 aa15.11■□□□□ 0.01
PTCD3-210ENST00000473829 RAB3CQ96E17 227 aa15.11■□□□□ 0.01
PTCD3-210ENST00000473829 CMSS1Q9BQ75 279 aaKnown RBP15.11■□□□□ 0.01
PTCD3-210ENST00000473829 PRSS22Q9GZN4 317 aa15.11■□□□□ 0.01
PTCD3-210ENST00000473829 Q9N2K0 584 aa15.11■□□□□ 0.01
PTCD3-210ENST00000473829 PKD1L1Q8TDX9 2849 aa15.11■□□□□ 0.01
PTCD3-210ENST00000473829 NBEAL1Q6ZS30 2694 aa15.1■□□□□ 0.01
PTCD3-210ENST00000473829 YPEL1O60688 119 aa15.1■□□□□ 0.01
PTCD3-210ENST00000473829 IGKV1D-33P01593 117 aa15.1■□□□□ 0.01
PTCD3-210ENST00000473829 IGKV1-33P01594 117 aa15.1■□□□□ 0.01
PTCD3-210ENST00000473829 GNB3P16520 340 aa15.1■□□□□ 0.01
PTCD3-210ENST00000473829 HLA-DRB3P79483 266 aa15.1■□□□□ 0.01
PTCD3-210ENST00000473829 PRR31Q5SQ13 230 aa15.1■□□□□ 0.01
PTCD3-210ENST00000473829 MOB3BQ86TA1 216 aa15.1■□□□□ 0.01
PTCD3-210ENST00000473829 THNSL2Q86YJ6 484 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms