RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 A3GALT2U3KPV4 340 aa14.46□□□□□ -0.09
SORT1-203ENST00000471996 OR7C1O76099 320 aaPredicted RBP14.45□□□□□ -0.1
SORT1-203ENST00000471996 NDUFA3O95167 84 aa14.45□□□□□ -0.1
SORT1-203ENST00000471996 MT-ND4P03905 459 aa14.45□□□□□ -0.1
SORT1-203ENST00000471996 EGR2P11161 476 aaPredicted RBP14.45□□□□□ -0.1
SORT1-203ENST00000471996 HOXB6P17509 224 aaKnown RBP14.45□□□□□ -0.1
SORT1-203ENST00000471996 TPPP2P59282 170 aa14.45□□□□□ -0.1
SORT1-203ENST00000471996 LCN12Q6JVE5 192 aa14.45□□□□□ -0.1
SORT1-203ENST00000471996 SERPINA12Q8IW75 414 aa14.45□□□□□ -0.1
SORT1-203ENST00000471996 OR9G4Q8NGQ1 327 aa14.45□□□□□ -0.1
SORT1-203ENST00000471996 TNFAIP8L1Q8WVP5 186 aa14.45□□□□□ -0.1
SORT1-203ENST00000471996 TMEM106AQ96A25 262 aa14.45□□□□□ -0.1
SORT1-203ENST00000471996 AQP12BA6NM10 295 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 GABRPO00591 440 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 SPINT2O43291 252 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 MITFO75030 526 aaPredicted RBP14.44□□□□□ -0.1
SORT1-203ENST00000471996 HTR3BO95264 441 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 HTR1AP08908 422 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 FSTP19883 344 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 CX3CL1P78423 397 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 KLF5Q13887 457 aaPredicted RBP14.44□□□□□ -0.1
SORT1-203ENST00000471996 TMEM30BQ3MIR4 351 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 ACTBL2Q562R1 376 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 LPCAT4Q643R3 524 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 ASCL4Q6XD76 172 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 ZNF497Q6ZNH5 498 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 KCTD20Q7Z5Y7 419 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 AQP12AQ8IXF9 295 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 Q8N402 240 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 RPP25LQ8N5L8 163 aaKnown RBP14.44□□□□□ -0.1
SORT1-203ENST00000471996 CCDC124Q96CT7 223 aaKnown RBP14.44□□□□□ -0.1
SORT1-203ENST00000471996 CPNE2Q96FN4 548 aaPredicted RBP14.44□□□□□ -0.1
SORT1-203ENST00000471996 MRPL20Q9BYC9 149 aaKnown RBP14.44□□□□□ -0.1
SORT1-203ENST00000471996 SLA2Q9H6Q3 261 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 PLEKHA3Q9HB20 300 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 RAB9BQ9NP90 201 aa14.44□□□□□ -0.1
SORT1-203ENST00000471996 CNOT2Q9NZN8 540 aaKnown RBP14.44□□□□□ -0.1
SORT1-203ENST00000471996 OR4C45A6NMZ5 311 aa14.43□□□□□ -0.1
SORT1-203ENST00000471996 AIPO00170 330 aa14.43□□□□□ -0.1
SORT1-203ENST00000471996 TMED1Q13445 227 aa14.43□□□□□ -0.1
SORT1-203ENST00000471996 NHLRC3Q5JS37 347 aa14.43□□□□□ -0.1
SORT1-203ENST00000471996 PARP16Q8N5Y8 322 aa14.43□□□□□ -0.1
SORT1-203ENST00000471996 GPER1Q99527 375 aa14.43□□□□□ -0.1
SORT1-203ENST00000471996 RNF150Q9ULK6 438 aa14.43□□□□□ -0.1
SORT1-203ENST00000471996 IZUMO1RA6ND01 250 aa14.42□□□□□ -0.1
SORT1-203ENST00000471996 GEMIN2O14893 280 aaKnown RBP14.42□□□□□ -0.1
SORT1-203ENST00000471996 CD40LGP29965 261 aa14.42□□□□□ -0.1
SORT1-203ENST00000471996 RBM11P57052 281 aaKnown RBP14.42□□□□□ -0.1
SORT1-203ENST00000471996 AKIRIN2Q53H80 203 aa14.42□□□□□ -0.1
SORT1-203ENST00000471996 UNQ5815/PRO19632Q6UWF5 114 aa14.42□□□□□ -0.1
SORT1-203ENST00000471996 PPP1R27Q86WC6 154 aa14.42□□□□□ -0.1
SORT1-203ENST00000471996 ODF3L1Q8IXM7 274 aa14.42□□□□□ -0.1
SORT1-203ENST00000471996 ABHD5Q8WTS1 349 aa14.42□□□□□ -0.1
SORT1-203ENST00000471996 FAM192AQ9GZU8 254 aa14.42□□□□□ -0.1
SORT1-203ENST00000471996 FAM53CQ9NYF3 392 aa14.42□□□□□ -0.1
SORT1-203ENST00000471996 SIGLEC8Q9NYZ4 499 aa14.42□□□□□ -0.1
SORT1-203ENST00000471996 DHDHQ9UQ10 334 aa14.42□□□□□ -0.1
SORT1-203ENST00000471996 FCN1O00602 326 aa14.41□□□□□ -0.1
SORT1-203ENST00000471996 SLC16A6O15403 523 aa14.41□□□□□ -0.1
SORT1-203ENST00000471996 CNIH1O95406 144 aa14.41□□□□□ -0.1
SORT1-203ENST00000471996 HBZP02008 142 aa14.41□□□□□ -0.1
SORT1-203ENST00000471996 TRGV3P03979 118 aa14.41□□□□□ -0.1
SORT1-203ENST00000471996 ATAD3CQ5T2N8 411 aa14.41□□□□□ -0.1
SORT1-203ENST00000471996 SYT6Q5T7P8 510 aaPredicted RBP14.41□□□□□ -0.1
SORT1-203ENST00000471996 LINC00596Q86U02 117 aa14.41□□□□□ -0.1
SORT1-203ENST00000471996 OR52N1Q8NH53 320 aa14.41□□□□□ -0.1
SORT1-203ENST00000471996 OR1L1Q8NH94 360 aa14.41□□□□□ -0.1
SORT1-203ENST00000471996 NEK7Q8TDX7 302 aa14.41□□□□□ -0.1
SORT1-203ENST00000471996 GATAD1Q8WUU5 269 aa14.41□□□□□ -0.1
SORT1-203ENST00000471996 FBXL15Q9H469 300 aa14.41□□□□□ -0.1
SORT1-203ENST00000471996 MAGEB3O15480 346 aa14.4□□□□□ -0.1
SORT1-203ENST00000471996 FKBP6O75344 327 aa14.4□□□□□ -0.1
SORT1-203ENST00000471996 TPPPO94811 219 aa14.4□□□□□ -0.1
SORT1-203ENST00000471996 CSN3P07498 182 aa14.4□□□□□ -0.1
SORT1-203ENST00000471996 T-ENOLP0DO92 83 aa14.4□□□□□ -0.1
SORT1-203ENST00000471996 SYNJ2BPP57105 145 aa14.4□□□□□ -0.1
SORT1-203ENST00000471996 CD81P60033 236 aa14.4□□□□□ -0.1
SORT1-203ENST00000471996 ALKBH1Q13686 389 aaKnown RBP14.4□□□□□ -0.1
SORT1-203ENST00000471996 MORN2Q502X0 79 aa14.4□□□□□ -0.1
SORT1-203ENST00000471996 PRR18Q8N4B5 295 aa14.4□□□□□ -0.1
SORT1-203ENST00000471996 STX19Q8N4C7 294 aa14.4□□□□□ -0.1
SORT1-203ENST00000471996 PELI1Q96FA3 418 aa14.4□□□□□ -0.1
SORT1-203ENST00000471996 FAM103A1Q9BTL3 118 aaKnown RBP14.4□□□□□ -0.1
SORT1-203ENST00000471996 ETAA1Q9NY74 926 aa14.4□□□□□ -0.1
SORT1-203ENST00000471996 TRAPPC2LQ9UL33 140 aa14.4□□□□□ -0.1
SORT1-203ENST00000471996 VPS13DQ5THJ4 4388 aa14.4□□□□□ -0.1
SORT1-203ENST00000471996 ANKRD34BA5PLL1 514 aa14.39□□□□□ -0.11
SORT1-203ENST00000471996 CXorf65A6NEN9 183 aa14.39□□□□□ -0.11
SORT1-203ENST00000471996 NUPR2A6NF83 97 aa14.39□□□□□ -0.11
SORT1-203ENST00000471996 RRHO14718 337 aa14.39□□□□□ -0.11
SORT1-203ENST00000471996 CDRT1O95170 752 aa14.39□□□□□ -0.11
SORT1-203ENST00000471996 RAB3AP20336 220 aa14.39□□□□□ -0.11
SORT1-203ENST00000471996 MPV17LQ2QL34 196 aa14.39□□□□□ -0.11
SORT1-203ENST00000471996 MOGAT2Q3SYC2 334 aa14.39□□□□□ -0.11
SORT1-203ENST00000471996 C6orf183Q5T699 404 aa14.39□□□□□ -0.11
SORT1-203ENST00000471996 ZNF529Q6P280 563 aa14.39□□□□□ -0.11
SORT1-203ENST00000471996 ZNF833PQ6ZTB9 187 aa14.39□□□□□ -0.11
SORT1-203ENST00000471996 LFNGQ8NES3 379 aa14.39□□□□□ -0.11
SORT1-203ENST00000471996 OR51A2Q8NGJ7 313 aa14.39□□□□□ -0.11
SORT1-203ENST00000471996 RGP1Q92546 391 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms