RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 VN1R4Q7Z5H5 301 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 CD302Q8IX05 232 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 C2orf73Q8N5S3 287 aaPredicted RBP1.67□□□□□ -2.14
VCL-203ENST00000461383 NATD1Q8N6N6 113 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 ERMNQ8TAM6 284 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 DDI1Q8WTU0 396 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 TAMM41Q96BW9 452 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 TVP23CQ96ET8 276 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 MED18Q9BUE0 208 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 HIGD2AQ9BW72 106 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 LCE3DQ9BYE3 92 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 ALX4Q9H161 411 aaPredicted RBP1.67□□□□□ -2.14
VCL-203ENST00000461383 SLC23A2Q9UGH3 650 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 ZNF230Q9UIE0 474 aaPredicted RBP1.67□□□□□ -2.14
VCL-203ENST00000461383 LINC00527Q9UJ94 153 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 RPUSD1Q9UJJ7 312 aaKnown RBP1.67□□□□□ -2.14
VCL-203ENST00000461383 ZNF391Q9UJN7 358 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 DNAJC12Q9UKB3 198 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 SNX10Q9Y5X0 201 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 LCTP09848 1927 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 CACNA1SQ13698 1873 aa1.67□□□□□ -2.14
VCL-203ENST00000461383 RAD50Q92878 1312 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 IGHV3OR15-7A0A075B7D8 119 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 GOLGA8KD6RF30 607 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 KLRC4-KLRK1H3BQV0 150 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 H3BSA7 217 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 GOLGA8MH3BSY2 632 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 SLC25A20O43772 301 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 HBZP02008 142 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 OR12D1P0DN82 309 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 HIST1H1CP16403 213 aaKnown RBP1.66□□□□□ -2.14
VCL-203ENST00000461383 CTLA4P16410 223 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 UGT2B7P16662 529 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 ORM2P19652 201 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 AKR1C2P52895 323 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 KRTAP10-1P60331 282 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 ACTBP60709 375 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 ACTG1P63261 375 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 DHRS2Q13268 280 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 TBC1D28Q2M2D7 210 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 PYCR3Q53H96 274 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 C10orf91Q5T1B1 145 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 DRAM2Q6UX65 266 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 FAM151BQ6UXP7 276 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 SCGB1D4Q6XE38 83 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 LRP11Q86VZ4 500 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 HS3ST5Q8IZT8 346 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 ZNF664Q8N3J9 261 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 TNFAIP8L1Q8WVP5 186 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 OR5P3Q8WZ94 311 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 CMTM5Q96DZ9 223 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 EIF5A2Q9GZV4 153 aaKnown RBP1.66□□□□□ -2.14
VCL-203ENST00000461383 GTSF1LQ9H1H1 148 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 ZNF286AQ9HBT8 521 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 IMP3Q9NV31 184 aaKnown RBP1.66□□□□□ -2.14
VCL-203ENST00000461383 ZNF443Q9Y2A4 671 aaPredicted RBP1.66□□□□□ -2.14
VCL-203ENST00000461383 FIS1Q9Y3D6 152 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 DSCAML1Q8TD84 2053 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 TRPM6Q9BX84 2022 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 ATAD5Q96QE3 1844 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 ARAP3Q8WWN8 1544 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 PTPRKQ15262 1439 aa1.66□□□□□ -2.14
VCL-203ENST00000461383 ZNF407Q9C0G0 2248 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 A0A1W2PNN7 141 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 COPEO14579 308 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 SSNA1O43805 119 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 STK16O75716 305 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 PSMG1O95456 288 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 CPSF4O95639 269 aaKnown RBP1.65□□□□□ -2.15
VCL-203ENST00000461383 LINC00614P0C842 121 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 PSMB3P49720 205 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 CLDN12P56749 244 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 DAD1P61803 113 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 MED21Q13503 144 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 CST6Q15828 149 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 NOXRED1Q6NXP6 359 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 DNM1P34Q6PK57 102 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 TMEM251Q8N6I4 163 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 MFSD8Q8NHS3 518 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 PPCDCQ96CD2 204 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 B9D2Q9BPU9 175 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 MROQ9BYG7 248 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 OR51B6Q9H340 312 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 C11orf49Q9H6J7 331 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 UBQLN4Q9NRR5 601 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 PARVAQ9NVD7 372 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 ALG5Q9Y673 324 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 CLUHO75153 1309 aa1.65□□□□□ -2.15
VCL-203ENST00000461383 ZSWIM8A7E2V4 1837 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 ATG2BQ96BY7 2078 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 TP53I11O14683 189 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 DENRO43583 198 aaKnown RBP1.64□□□□□ -2.15
VCL-203ENST00000461383 APOEP02649 317 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 CRYBA1P05813 215 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 OR4A8P0C604 315 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 OCM2P0CE71 109 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 IFNGR2P38484 337 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 RPL14P50914 215 aaKnown RBP1.64□□□□□ -2.15
VCL-203ENST00000461383 H2BFSP57053 126 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 BSPH1Q075Z2 132 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms