RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 RAMP3O60896 148 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 ZNF25P17030 456 aaPredicted RBP8.66□□□□□ -1.02
USP39-210ENST00000459775 EFNB3Q15768 340 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 UBE2NLQ5JXB2 153 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 FAM131AQ6UXB0 335 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 ASCL4Q6XD76 172 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 OR11L1Q8NGX0 322 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 SCARB1Q8WTV0 552 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 GSKIPQ9P0R6 139 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 URGCP-MRPS24S4R325 110 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 TRAV18A0A075B6X5 111 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 HSPB6O14558 160 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 ZNF780AO75290 641 aaPredicted RBP8.66□□□□□ -1.02
USP39-210ENST00000459775 ACTL6BO94805 426 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 IFNA21P01568 189 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 RD3LP0DJH9 198 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 PAX1P15863 534 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 GNB3P16520 340 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 MPZP25189 248 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 SLC6A1P30531 599 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 CD200P41217 278 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 RAB9AP51151 201 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 CD81P60033 236 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 KRTAP10-9P60411 292 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 ZFP69Q49AA0 526 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 CDNFQ49AH0 187 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 TMEM41BQ5BJD5 291 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 C17orf107Q6ZR85 190 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 HSD17B11Q8NBQ5 300 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 OR51T1Q8NGJ9 327 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 LRRC29Q8WV35 223 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 DYRK2Q92630 601 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 SDHCQ99643 169 aaPredicted RBP8.66□□□□□ -1.02
USP39-210ENST00000459775 TMEM208Q9BTX3 173 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 TMEM59Q9BXS4 323 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 RAB22AQ9UL26 194 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 MMP24Q9Y5R2 645 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 POLQO75417 2590 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 MEIOCA2RUB1 952 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 MEIS3P1A6NDR6 274 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 TRAPPC2LH3BP13 241 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.65□□□□□ -1.02
USP39-210ENST00000459775 RAB27BO00194 218 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 HLA-DQB1P01920 261 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 PTH2RP49190 550 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 TMEM50BP56557 158 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 RPS27AP62979 156 aaKnown RBP8.65□□□□□ -1.02
USP39-210ENST00000459775 RAB32Q13637 225 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 C5orf47Q569G3 176 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 C11orf71Q6IPW1 123 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 LRRC28Q86X40 367 aaPredicted RBP8.65□□□□□ -1.02
USP39-210ENST00000459775 OSR2Q8N2R0 312 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 CHST4Q8NCG5 386 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 DEFB108BQ8NET1 73 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 PXT1Q8NFP0 134 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 DMBX1Q8NFW5 382 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 KCNG3Q8TAE7 436 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 CCL17Q92583 94 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 WDFY2Q96P53 400 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 SOSTQ9BQB4 213 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 SRRQ9GZT4 340 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 ABCG5Q9H222 651 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 MS4A5Q9H3V2 200 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 PLEKHF2Q9H8W4 249 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 ST3GAL6Q9Y274 331 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 ETV7Q9Y603 341 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 CHD3Q12873 2000 aaKnown RBP8.65□□□□□ -1.02
USP39-210ENST00000459775 ARFGEF3Q5TH69 2177 aa8.65□□□□□ -1.02
USP39-210ENST00000459775 USF3Q68DE3 2245 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 FAM240BA0A1B0GVZ2 78 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 PGA5P0DJD9 388 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 GTF2F2P13984 249 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 COL8A2P25067 703 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 SNRPD2P62316 118 aaKnown RBP8.65□□□□□ -1.03
USP39-210ENST00000459775 IFITM3Q01628 133 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 NKAPLQ5M9Q1 402 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 TMEM69Q5SWH9 247 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 OR8G2PQ6IF36 304 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 C6orf201Q7Z4U5 140 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 MKXQ8IYA7 352 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 GCSAMQ8N6F7 178 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 BEND2Q8NDZ0 799 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 EMG1Q92979 244 aaKnown RBP8.65□□□□□ -1.03
USP39-210ENST00000459775 S100A16Q96FQ6 103 aaKnown RBP8.65□□□□□ -1.03
USP39-210ENST00000459775 ARHGAP5-AS1Q96IT6 56 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 Q96M66 194 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 NRIP2Q9BQI9 281 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 CST11Q9H112 138 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 TLNRD1Q9H1K6 362 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 SAP30LQ9HAJ7 183 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 CBLN4Q9NTU7 201 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 OR14J1Q9UGF5 321 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 NPTNQ9Y639 398 aa8.65□□□□□ -1.03
USP39-210ENST00000459775 SPG11Q96JI7 2443 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 TMEM235A6NFC5 223 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 CLDN25C9JDP6 229 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 PTTG1O95997 202 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 SCGB1A1P11684 91 aa8.64□□□□□ -1.03
USP39-210ENST00000459775 BLVRBP30043 206 aaPredicted RBP8.64□□□□□ -1.03
USP39-210ENST00000459775 ID1P41134 155 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms