RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 HSPB9Q9BQS6 159 aa6.25□□□□□ -1.41
NIF3L1-209ENST00000454952 ZNF251Q9BRH9 671 aa6.25□□□□□ -1.41
NIF3L1-209ENST00000454952 CST11Q9H112 138 aa6.25□□□□□ -1.41
NIF3L1-209ENST00000454952 ISYNA1Q9NPH2 558 aa6.25□□□□□ -1.41
NIF3L1-209ENST00000454952 ERVK13-1Q9NX77 482 aa6.25□□□□□ -1.41
NIF3L1-209ENST00000454952 TAS2R4Q9NYW5 299 aa6.25□□□□□ -1.41
NIF3L1-209ENST00000454952 CKLFQ9UBR5 152 aa6.25□□□□□ -1.41
NIF3L1-209ENST00000454952 RPL36Q9Y3U8 105 aaKnown RBP6.25□□□□□ -1.41
NIF3L1-209ENST00000454952 GMPPBQ9Y5P6 360 aa6.25□□□□□ -1.41
NIF3L1-209ENST00000454952 TRAV39A0A0B4J263 110 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 TRAV41A0A0B4J266 112 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 I3L521 148 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 GEMIN2O14893 280 aaKnown RBP6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 RGS11O94810 467 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 CDRT1O95170 752 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 HLA-DRB1P01911 266 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 GLAP06280 429 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 OR8U9P0C7N5 309 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 SERPINA2P20848 420 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 BDKRB2P30411 391 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 SOX2P48431 317 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 ALDH3A2P51648 485 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 F2RL1P55085 397 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 GABPB1Q06547 395 aaPredicted RBP6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 LSAMPQ13449 338 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 SLC22A6Q4U2R8 563 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 PYHIN1Q6K0P9 492 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 RPL22L1Q6P5R6 122 aaKnown RBP6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 TMPRSS11AQ6ZMR5 421 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 C10orf67Q8IYJ2 551 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 ZNF491Q8N8L2 437 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 TMEM106AQ96A25 262 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 ISG20L2Q9H9L3 353 aaKnown RBP6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 ETAA1Q9NY74 926 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 KCNIP1Q9NZI2 227 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 KIAA1456Q9P272 454 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 RNF150Q9ULK6 438 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 LRRC42Q9Y546 428 aa6.24□□□□□ -1.41
NIF3L1-209ENST00000454952 IGHV3-43A0A0B4J1X8 118 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 IRGMA1A4Y4 181 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 FAM90A10PA6NDY2 464 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 FAM90A7PA6NKC0 464 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 FAM90A23PA8MXZ1 464 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 ZNF736B4DX44 427 aaPredicted RBP6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 C12orf77C9JDV5 145 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 E9PI62 339 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 LINC01619G3V211 115 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 EI24O14681 340 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 NBR2O15453 112 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 SAP30O75446 220 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 IGLV1-40P01703 118 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 HBZP02008 142 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 IGHV3-43DP0DP04 118 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 SLC2A2P11168 524 aaPredicted RBP6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 MYF6P23409 242 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 CD40LGP29965 261 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 PPIFP30405 207 aaKnown RBP6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 RAB9AP51151 201 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 ACTBP60709 375 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 TMEM267Q0VDI3 215 aaPredicted RBP6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 RIPK1Q13546 671 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 CT45A1Q5HYN5 189 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 LY6G6FQ5SQ64 297 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 SYT6Q5T7P8 510 aaPredicted RBP6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 ZNF660Q6AZW8 331 aaPredicted RBP6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 LIN54Q6MZP7 749 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 CDPF1Q6NVV7 123 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 ZFP1Q6P2D0 407 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 LYPD6Q86Y78 171 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 SBSPONQ8IVN8 264 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 ZNF439Q8NDP4 499 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 CT45A3Q8NHU0 189 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 DCUN1D4Q92564 292 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 FLYWCH2Q96CP2 140 aaKnown RBP6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 ABHD14AQ9BUJ0 271 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 GNB4Q9HAV0 340 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 OR2S2Q9NQN1 319 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 PARP11Q9NR21 331 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 MRPS18AQ9NVS2 196 aaKnown RBP6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 RCC2Q9P258 522 aaKnown RBP6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 JPT1Q9UK76 154 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 FOXA2Q9Y261 457 aaPredicted RBP6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 DNAH9Q9NYC9 4486 aa6.23□□□□□ -1.41
NIF3L1-209ENST00000454952 LCE6AA0A183 80 aa6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 RGS13O14921 159 aa6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 LDLRAD4O15165 306 aa6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 ATP6V0E1O15342 81 aa6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 SLC31A2O15432 143 aa6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 GPX5O75715 221 aa6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 LGALS1P09382 135 aaKnown RBP6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 FRMD6-AS1P0C7T7 363 aa6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 GP9P14770 177 aa6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 SPNP16150 400 aa6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 GABRB1P18505 474 aa6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 MYL12AP19105 171 aa6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 DCKP27707 260 aa6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 VHLP40337 213 aa6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 GNB1P62873 340 aa6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 HTD2P86397 168 aa6.22□□□□□ -1.41
NIF3L1-209ENST00000454952 PITPNAQ00169 270 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms