RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-208ENST00000441141 SMDT1Q9H4I9 107 aa1.28□□□□□ -2.2
VPS8-208ENST00000441141 PSMD13Q9UNM6 376 aa1.28□□□□□ -2.2
VPS8-208ENST00000441141 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.28□□□□□ -2.2
VPS8-208ENST00000441141 KMT2EQ8IZD2 1858 aa1.28□□□□□ -2.2
VPS8-208ENST00000441141 ICE1Q9Y2F5 2266 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 PLXNA3P51805 1871 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 ATAD5Q96QE3 1844 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 SHANK3Q9BYB0 1731 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 TRPM3Q9HCF6 1732 aaPredicted RBP1.27□□□□□ -2.21
VPS8-208ENST00000441141 PTPRJQ12913 1337 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 A0A1W2PQL4 384 aaPredicted RBP1.27□□□□□ -2.21
VPS8-208ENST00000441141 ODF3BA8MYP8 253 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 K7ERQ8 282 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 GPR171O14626 319 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 TRAPPC3O43617 180 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 CDK14O94921 469 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 LCN1P31025 176 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 ZNF140P52738 457 aaPredicted RBP1.27□□□□□ -2.21
VPS8-208ENST00000441141 RAB8AP61006 207 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 FAM3AP98173 230 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 KRTAP21-3Q3LHN1 58 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 CENPWQ5EE01 88 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 EBLN2Q6P2I7 272 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 VN1R4Q7Z5H5 301 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 ATP6V1C2Q8NEY4 427 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 OR51H1Q8NH63 302 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 OR10A6Q8NH74 314 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 MGLLQ99685 303 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 C1QTNF6Q9BXI9 259 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 TTTY12Q9BZ98 90 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 CHST5Q9GZS9 411 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 GTSF1LQ9H1H1 148 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 UBQLN4Q9NRR5 601 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 ENPP5Q9UJA9 477 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 MTCH2Q9Y6C9 303 aa1.27□□□□□ -2.21
VPS8-208ENST00000441141 CACNA1SQ13698 1873 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 IGKV1-12A0A0C4DH73 117 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 A0A0J9YX75 114 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 DHRS12A0PJE2 317 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 GRIFINA4D1Z8 144 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 F5H5K5 113 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 M0QYV0 167 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 IGKV1D-12P01611 117 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 LIMS3P0CW19 117 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 LIMS4P0CW20 117 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 IGHV3-30-3P0DP02 117 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 ZNF7P17097 686 aaPredicted RBP1.26□□□□□ -2.21
VPS8-208ENST00000441141 PVALBP20472 110 aaPredicted RBP1.26□□□□□ -2.21
VPS8-208ENST00000441141 PPP1CCP36873 323 aaKnown RBP1.26□□□□□ -2.21
VPS8-208ENST00000441141 COILP38432 576 aaPredicted RBP1.26□□□□□ -2.21
VPS8-208ENST00000441141 GABRA4P48169 554 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 SULT1A2P50226 295 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 KRTAP12-1P59990 96 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 XRCC4Q13426 336 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 ANGPT1Q15389 498 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 CLEC12BQ2HXU8 276 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 COPS6Q7L5N1 327 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 TMEM25Q86YD3 366 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 OR5AK3PQ8NH89 298 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 LRRC45Q96CN5 670 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 SMIM12Q96EX1 92 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 CXCL16Q9H2A7 254 aa1.26□□□□□ -2.21
VPS8-208ENST00000441141 COL11A1P12107 1806 aaPredicted RBP1.26□□□□□ -2.21
VPS8-208ENST00000441141 DNMT1P26358 1616 aaKnown RBP1.26□□□□□ -2.21
VPS8-208ENST00000441141 SYNRGQ9UMZ2 1314 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 LINC00862A6NCI5 91 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 FNDC10F2Z333 226 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 UBFD1O14562 309 aaKnown RBP1.25□□□□□ -2.21
VPS8-208ENST00000441141 STK16O75716 305 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 SLC35E2BP0CK96 405 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 OR2B6P58173 313 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 OR10A3P58181 314 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 BSPH1Q075Z2 132 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 PRDX4Q13162 271 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 TRMT12Q53H54 448 aaKnown RBP1.25□□□□□ -2.21
VPS8-208ENST00000441141 TIMM23BQ5SRD1 257 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 HES3Q5TGS1 186 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 SCGB1D4Q6XE38 83 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 NATD1Q8N6N6 113 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 RNASE11Q8TAA1 199 aaKnown RBP1.25□□□□□ -2.21
VPS8-208ENST00000441141 TMBIM1Q969X1 311 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 TAMM41Q96BW9 452 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 MRPS24Q96EL2 167 aaKnown RBP1.25□□□□□ -2.21
VPS8-208ENST00000441141 CDCA4Q9BXL8 241 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 EIF5A2Q9GZV4 153 aaKnown RBP1.25□□□□□ -2.21
VPS8-208ENST00000441141 OR52A5Q9H2C5 316 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 METTL17Q9H7H0 456 aaPredicted RBP1.25□□□□□ -2.21
VPS8-208ENST00000441141 GLS2Q9UI32 602 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 LINC00527Q9UJ94 153 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 DNAJC12Q9UKB3 198 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 SNX10Q9Y5X0 201 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 STRCP1A6NGW2 1772 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 COL18A1P39060 1754 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 SLIT2O94813 1529 aa1.25□□□□□ -2.21
VPS8-208ENST00000441141 MPDZO75970 2070 aa1.24□□□□□ -2.21
VPS8-208ENST00000441141 TRPM6Q9BX84 2022 aa1.24□□□□□ -2.21
VPS8-208ENST00000441141 IGHV3-73A0A0B4J1V6 119 aa1.24□□□□□ -2.21
VPS8-208ENST00000441141 C19orf71A6NCJ1 209 aa1.24□□□□□ -2.21
VPS8-208ENST00000441141 C9J4A7 227 aa1.24□□□□□ -2.21
VPS8-208ENST00000441141 H3BRN7 92 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms