RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 MUC3AQ02505 3323 aa11.58□□□□□ -0.56
COL6A3-207ENST00000433762 SLC33A1O00400 549 aaPredicted RBP11.58□□□□□ -0.56
COL6A3-207ENST00000433762 HSPB6O14558 160 aa11.58□□□□□ -0.56
COL6A3-207ENST00000433762 HS3ST1O14792 307 aa11.58□□□□□ -0.56
COL6A3-207ENST00000433762 ARG1P05089 322 aa11.58□□□□□ -0.56
COL6A3-207ENST00000433762 PGA5P0DJD9 388 aa11.58□□□□□ -0.56
COL6A3-207ENST00000433762 DAOP14920 347 aa11.58□□□□□ -0.56
COL6A3-207ENST00000433762 ITGA3P26006 1051 aa11.58□□□□□ -0.56
COL6A3-207ENST00000433762 TAGLN2P37802 199 aaKnown RBP11.58□□□□□ -0.56
COL6A3-207ENST00000433762 SLC10A1Q14973 349 aa11.58□□□□□ -0.56
COL6A3-207ENST00000433762 LPAL2Q16609 132 aa11.58□□□□□ -0.56
COL6A3-207ENST00000433762 LRRC75BQ2VPJ9 315 aa11.58□□□□□ -0.56
COL6A3-207ENST00000433762 ZNF525Q8N782 197 aa11.58□□□□□ -0.56
COL6A3-207ENST00000433762 RNASE11Q8TAA1 199 aaKnown RBP11.58□□□□□ -0.56
COL6A3-207ENST00000433762 TMEM9BQ9NQ34 198 aa11.58□□□□□ -0.56
COL6A3-207ENST00000433762 ESPL1Q14674 2120 aa11.58□□□□□ -0.56
COL6A3-207ENST00000433762 F10P00742 488 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 IGKV1-39P01597 117 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 IGKV1D-39P04432 117 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 RAC2P15153 192 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 TUBG1P23258 451 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 GLIPR1P48060 266 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 RUNX1Q01196 453 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 ADAM5Q6NVV9 412 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 FIP1L1Q6UN15 594 aaKnown RBP11.57□□□□□ -0.56
COL6A3-207ENST00000433762 CENPVQ7Z7K6 275 aaPredicted RBP11.57□□□□□ -0.56
COL6A3-207ENST00000433762 LOXL4Q96JB6 756 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 HES7Q9BYE0 225 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 TUBG2Q9NRH3 451 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 FOXJ2Q9P0K8 574 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 CACNG5Q9UF02 275 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 SH2D1BO14796 132 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 TNFSF12O43508 249 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 CA6P23280 308 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 DLK1P80370 383 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 HAGHQ16775 308 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 SLC25A24Q6NUK1 477 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 MDP1Q86V88 176 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 THNSL2Q86YJ6 484 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 CYB561D1Q8N8Q1 229 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 OR51H1Q8NH63 302 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 PSENENQ9NZ42 101 aa11.57□□□□□ -0.56
COL6A3-207ENST00000433762 A0A1W2PPE3 182 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 IQCF6A8MYZ5 107 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 C1QTNF9BB2RNN3 333 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 OR2H2O95918 312 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 IFNA1P01562 189 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 IGKV1-5P01602 117 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 BCL2P10415 239 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 CD46P15529 392 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 MPLP40238 635 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 ATP6V1FQ16864 119 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 OR2T2Q6IF00 324 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 C5orf24Q7Z6I8 188 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 FAM216AQ8WUB2 273 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 WDYHV1Q96HA8 205 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 ZNF488Q96MN9 340 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 HES4Q9HCC6 221 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 PRSS50Q9UI38 385 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 LILRA1O75019 489 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 MT-CO3P00414 261 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 HOXA5P20719 270 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 RND2P52198 227 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 TGFBR3Q03167 851 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 ELOBQ15370 118 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 ZNF585BQ52M93 769 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 TMEM41BQ5BJD5 291 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 SCCPDHQ8NBX0 429 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 GMPPAQ96IJ6 420 aaPredicted RBP11.56□□□□□ -0.56
COL6A3-207ENST00000433762 OR51M1Q9H341 326 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 OR1A1Q9P1Q5 309 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 TRAPPC2LQ9UL33 140 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 USP34Q70CQ2 3546 aa11.56□□□□□ -0.56
COL6A3-207ENST00000433762 MED19A0JLT2 244 aaPredicted RBP11.55□□□□□ -0.56
COL6A3-207ENST00000433762 ZNF891A8MT65 544 aaPredicted RBP11.55□□□□□ -0.56
COL6A3-207ENST00000433762 SMPD2O60906 423 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 RHBDL1O75783 438 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 ZNF806P0C7X5 589 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 S100PP25815 95 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 Q6ZRM9 215 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 MRGPRGQ86SM5 289 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 C17orf78Q8N4C9 275 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 GPHA2Q96T91 129 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 RFNGQ9Y644 331 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 A0A1B0GV50 99 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 LY86O95711 162 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 SOX8P57073 446 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 PPP1CBP62140 327 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 FAM90A2PQ658T7 463 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 ZNF787Q6DD87 383 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 TMEM14EPQ6UXP3 125 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 AGMATQ9BSE5 352 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 WDR61Q9GZS3 305 aaKnown RBP11.55□□□□□ -0.56
COL6A3-207ENST00000433762 CTDSP1Q9GZU7 261 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 ZDHHC11Q9H8X9 412 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 RPRMQ9NS64 109 aa11.55□□□□□ -0.56
COL6A3-207ENST00000433762 H0YL77 283 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 TGIF1Q15583 401 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 ZNF766Q5HY98 468 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 SLC35E4Q6ICL7 350 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms