RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 ZNF48Q96MX3 618 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-202ENST00000359366 CNTNAP3BQ96NU0 1288 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 HIST1H2AAQ96QV6 131 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 GPHA2Q96T91 129 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 ATP6V0BQ99437 205 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 CITED2Q99967 270 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-202ENST00000359366 ADAT1Q9BUB4 502 aaKnown RBP4.32□□□□□ -1.72
ATXN3-202ENST00000359366 TM2D1Q9BX74 207 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 CNTNAP3Q9BZ76 1288 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 WDR13Q9H1Z4 485 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 LIME1Q9H400 295 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 ZNF442Q9H7R0 627 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 DUSP13Q9UII6 198 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 ZNF391Q9UJN7 358 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 NPTNQ9Y639 398 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 USP24Q9UPU5 2620 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 MEIKINA0A087WXM9 373 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 IGHV2OR16-5A0A0B4J2B6 119 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 CREBL2O60519 120 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-202ENST00000359366 CST4P01036 141 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 IGKV3-15P01624 115 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 HLA-AP01891 365 aaKnown RBP4.32□□□□□ -1.72
ATXN3-202ENST00000359366 OR8U8P0C7N1 319 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 ZNF35P13682 527 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 ZNF44P15621 663 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 GLRA1P23415 457 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 LY6DQ14210 128 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 SLC9A3R2Q15599 337 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 PYY3Q5JQD4 70 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 ZNF626Q68DY1 528 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 FAHD2BQ6P2I3 314 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-202ENST00000359366 Q6ZR03 302 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 KCTD9Q7L273 389 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 PUSL1Q8N0Z8 303 aaKnown RBP4.32□□□□□ -1.72
ATXN3-202ENST00000359366 ZSCAN4Q8NAM6 433 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-202ENST00000359366 PXT1Q8NFP0 134 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 OR2T35Q8NGX2 323 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 SMIM12Q96EX1 92 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 FAHD2AQ96GK7 314 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 SYT3Q9BQG1 590 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 OBP2BQ9NPH6 170 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 DLL4Q9NR61 685 aa4.32□□□□□ -1.72
ATXN3-202ENST00000359366 OR5H14A6NHG9 310 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 OR5H1A6NKK0 313 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 SEC14L6B5MCN3 397 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 G3V3Q6 166 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 TRAPPC2LH3BP13 241 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 SIRPB1O00241 398 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 MLNRO43193 412 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 TIMM8AO60220 97 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-202ENST00000359366 KNG1P01042 644 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 HOXB5P09067 269 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 PPP3CBP16298 524 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 HOXA5P20719 270 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 FGF7P21781 194 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 CD1BP29016 333 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 CCKARP32238 428 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 TMPRSS3P57727 454 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 FXYD4P59646 89 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 ZNF154Q13106 437 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 DHRS2Q13268 280 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 LRRC37A5PQ49AS3 106 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 SLC22A25Q6T423 547 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 PRSS57Q6UWY2 283 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 ASCL4Q6XD76 172 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 C20orf204Q6ZNR8 217 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 HOGA1Q86XE5 327 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 BOLLQ8N9W6 283 aaKnown RBP4.31□□□□□ -1.72
ATXN3-202ENST00000359366 SCCPDHQ8NBX0 429 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 OR5L1Q8NGL2 311 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 CCDC107Q8WV48 283 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 DPF1Q92782 380 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 TOMM40LQ969M1 308 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 SEC22AQ96IW7 307 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 CXorf58Q96LI9 332 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 PIPOXQ9P0Z9 390 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 OR14J1Q9UGF5 321 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 SLC25A15Q9Y619 301 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 MED13LQ71F56 2210 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 A6NLC8 198 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 SERPINE3A8MV23 424 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 PRRG2O14669 202 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 PDCD6O75340 191 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 FCGR3AP08637 254 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 RD3LP0DJH9 198 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 NFYAP23511 347 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-202ENST00000359366 CD200P41217 278 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 MECP2P51608 486 aaKnown RBP4.31□□□□□ -1.72
ATXN3-202ENST00000359366 KLF3P57682 345 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-202ENST00000359366 GNG3P63215 75 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 DLK1P80370 383 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 SSBP1Q04837 148 aaKnown RBP4.31□□□□□ -1.72
ATXN3-202ENST00000359366 SCGB2A2Q13296 93 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 MRPL49Q13405 166 aaKnown RBP4.31□□□□□ -1.72
ATXN3-202ENST00000359366 MEF2DQ14814 521 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 AADACL3Q5VUY0 350 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 EIF5AL1Q6IS14 154 aaKnown RBP4.31□□□□□ -1.72
ATXN3-202ENST00000359366 FBXW12Q6X9E4 464 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 ZFP82Q8N141 532 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 FTMTQ8N4E7 242 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms