RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 PFDN5Q99471 154 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 PARP11Q9NR21 331 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 ZNF107Q9UII5 783 aaPredicted RBP6.46□□□□□ -1.37
TRIM55-202ENST00000315962 MEMO1Q9Y316 297 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 KPTNQ9Y664 436 aa6.46□□□□□ -1.37
TRIM55-202ENST00000315962 TGIF2-C20orf24A0A0A6YYL0 155 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 IFITM10A6NMD0 228 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 MKRN2OSH3BPM6 223 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 AQP7O14520 342 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 SMPD2O60906 423 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 OR2C1O95371 312 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 MT-ND4LP03901 98 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 CXCL1P09341 107 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 SCTP09683 121 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 CECR9P0C854 216 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 SMIM6P0DI80 62 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 AGAP20933 346 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 RBM11P57052 281 aaKnown RBP6.46□□□□□ -1.38
TRIM55-202ENST00000315962 PYY3Q5JQD4 70 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 OR2B11Q5JQS5 317 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 NSUN5P2Q63ZY6 315 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 EIF5AL1Q6IS14 154 aaKnown RBP6.46□□□□□ -1.38
TRIM55-202ENST00000315962 ZNF474Q6S9Z5 364 aaPredicted RBP6.46□□□□□ -1.38
TRIM55-202ENST00000315962 TPRX1Q8N7U7 411 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 S100PBPQ96BU1 408 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 PLPPR2Q96GM1 343 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 OCSTAMPQ9BR26 566 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 SSUH2Q9Y2M2 353 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 FOXI3A8MTJ6 420 aaPredicted RBP6.46□□□□□ -1.38
TRIM55-202ENST00000315962 TRAPPC2LH3BP13 241 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 M0R1B8 84 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 SIRPB1O00241 398 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 SSSCA1O60232 199 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 CEACAM4O75871 244 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 JTBO76095 146 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 RNF224P0DH78 156 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 MPZP25189 248 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 CHATP28329 748 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 Q6ZS92 163 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 ZCCHC24Q8N2G6 241 aaKnown RBP6.46□□□□□ -1.38
TRIM55-202ENST00000315962 ZNF561Q8N587 486 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 WDR31Q8NA23 367 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 GGACTQ9BVM4 153 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 FAM212BQ9NTI7 297 aaPredicted RBP6.46□□□□□ -1.38
TRIM55-202ENST00000315962 FBLN5Q9UBX5 448 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 ANXA10Q9UJ72 324 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 PROCRQ9UNN8 238 aa6.46□□□□□ -1.38
TRIM55-202ENST00000315962 CSMD2Q7Z408 3487 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 ACACBO00763 2458 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 SERPINE3A8MV23 424 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 TBPP20226 339 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 TAS2R46P59540 309 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 NRN1LQ496H8 165 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 SPIN3Q5JUX0 258 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 PRAMEF6Q5VXH4 476 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 SLC35G3Q8N808 338 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 ZNF383Q8NA42 475 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 OR10D4PQ8NGN7 298 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 NANOS1Q8WY41 292 aaKnown RBP6.45□□□□□ -1.38
TRIM55-202ENST00000315962 OR5P3Q8WZ94 311 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 TP53RKQ96S44 253 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 SCRT1Q9BWW7 348 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 NKX2-6A6NCS4 301 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 IGHV3-13P01766 116 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 IGHV3-7P01780 117 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 ZNF728P0DKX0 622 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 LYL1P12980 280 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 EPHA1P21709 976 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 ALDH3B1P43353 468 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 ZNF154Q13106 437 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 SPRNQ5BIV9 151 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 SOHLH1Q5JUK2 328 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 SUMF2Q8NBJ7 301 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 OR2G3Q8NGZ4 309 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 C10orf35Q96D05 121 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 SNRNP40Q96DI7 357 aaKnown RBP6.45□□□□□ -1.38
TRIM55-202ENST00000315962 SYT3Q9BQG1 590 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 TM2D1Q9BX74 207 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 GPR61Q9BZJ8 451 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 SLC2A9Q9NRM0 540 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 DNAJB11Q9UBS4 358 aa6.45□□□□□ -1.38
TRIM55-202ENST00000315962 TMEM238LA0A1B0GVL6 79 aa6.44□□□□□ -1.38
TRIM55-202ENST00000315962 CRYM-AS1A6NIL9 109 aa6.44□□□□□ -1.38
TRIM55-202ENST00000315962 AP4M1O00189 453 aa6.44□□□□□ -1.38
TRIM55-202ENST00000315962 PPIHO43447 177 aaKnown RBP6.44□□□□□ -1.38
TRIM55-202ENST00000315962 GATCO43716 136 aaKnown RBP6.44□□□□□ -1.38
TRIM55-202ENST00000315962 IGHV2-70P01814 119 aa6.44□□□□□ -1.38
TRIM55-202ENST00000315962 IGHV2-5P01817 119 aa6.44□□□□□ -1.38
TRIM55-202ENST00000315962 FUT3P21217 361 aa6.44□□□□□ -1.38
TRIM55-202ENST00000315962 TAGLN2P37802 199 aaKnown RBP6.44□□□□□ -1.38
TRIM55-202ENST00000315962 ERVFRD-1P60508 538 aa6.44□□□□□ -1.38
TRIM55-202ENST00000315962 MSMPQ1L6U9 139 aa6.44□□□□□ -1.38
TRIM55-202ENST00000315962 CXorf66Q5JRM2 361 aaPredicted RBP6.44□□□□□ -1.38
TRIM55-202ENST00000315962 MKXQ8IYA7 352 aa6.44□□□□□ -1.38
TRIM55-202ENST00000315962 CYB561D1Q8N8Q1 229 aa6.44□□□□□ -1.38
TRIM55-202ENST00000315962 SCCPDHQ8NBX0 429 aa6.44□□□□□ -1.38
TRIM55-202ENST00000315962 CCDC54Q8NEL0 328 aa6.44□□□□□ -1.38
TRIM55-202ENST00000315962 Q8WTZ3 238 aa6.44□□□□□ -1.38
TRIM55-202ENST00000315962 TMEM171Q8WVE6 324 aa6.44□□□□□ -1.38
TRIM55-202ENST00000315962 RAB39BQ96DA2 213 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms