RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 IL18BPO95998 194 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 DLK1P80370 383 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 TCEAL7Q9BRU2 100 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 C12orf49Q9H741 205 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 KIAA2026Q5HYC2 2103 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 CELSR3Q9NYQ7 3312 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 A0A087WWC5 75 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 TRAV1-1A0A0B4J248 108 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 A0A1W2PNU3 283 aaPredicted RBP12.93□□□□□ -0.34
DDX56-201ENST00000258772 LRP5LA4QPB2 252 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 J3QT63 122 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 TESK1Q15569 626 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 KHDC3LQ587J8 217 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 SPATA46Q5T0L3 261 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 SLC25A24Q6NUK1 477 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 P4HA3Q7Z4N8 544 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 OR1K1Q8NGR3 316 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 CACNG5Q9UF02 275 aa12.93□□□□□ -0.34
DDX56-201ENST00000258772 SYNGR2O43760 224 aa12.92□□□□□ -0.34
DDX56-201ENST00000258772 ARL6IP6Q8N6S5 226 aa12.92□□□□□ -0.34
DDX56-201ENST00000258772 BCL2L2Q92843 193 aaPredicted RBP12.92□□□□□ -0.34
DDX56-201ENST00000258772 TVP23CQ96ET8 276 aa12.92□□□□□ -0.34
DDX56-201ENST00000258772 ZNF251Q9BRH9 671 aa12.92□□□□□ -0.34
DDX56-201ENST00000258772 GP6Q9HCN6 339 aa12.92□□□□□ -0.34
DDX56-201ENST00000258772 TREM2Q9NZC2 230 aa12.92□□□□□ -0.34
DDX56-201ENST00000258772 MT-CO3P00414 261 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 ZNF883P0CG24 379 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 MDH2P40926 338 aaKnown RBP12.91□□□□□ -0.34
DDX56-201ENST00000258772 RPS10P46783 165 aaKnown RBP12.91□□□□□ -0.34
DDX56-201ENST00000258772 MEOX1P50221 254 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 MDP1Q86V88 176 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 PRR18Q8N4B5 295 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 TCTEX1D2Q8WW35 142 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 NIPSNAP3BQ9BS92 247 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 RSG1Q9BU20 258 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 PPP1R3CQ9UQK1 317 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 DIDO1Q9BTC0 2240 aaKnown RBP12.91□□□□□ -0.34
DDX56-201ENST00000258772 TMEM238LA0A1B0GVL6 79 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 A0A1W2PR80 420 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 C21orf140B9A014 251 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 IGKV1-5P01602 117 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 MOB1BQ7L9L4 216 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 NIT2Q9NQR4 276 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 RPRMQ9NS64 109 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 PSENENQ9NZ42 101 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 MMP24Q9Y5R2 645 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 R4GN57 208 aa12.91□□□□□ -0.34
DDX56-201ENST00000258772 LOC102723971A0A1B0GUV8 181 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 SIRPB1O00241 398 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 OR2H2O95918 312 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 SP1P08047 785 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 IAPPP10997 89 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 EIF2S3P41091 472 aaKnown RBP12.9□□□□□ -0.34
DDX56-201ENST00000258772 ELOBQ15370 118 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 ZNF585BQ52M93 769 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 FBXW9Q5XUX1 488 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 ZNF497Q6ZNH5 498 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 SCGB1C1Q8TD33 95 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 TRAPPC2LQ9UL33 140 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 RBM7Q9Y580 266 aaKnown RBP12.9□□□□□ -0.34
DDX56-201ENST00000258772 CLN5O75503 358 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 METTL15P1P0C7V9 234 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 ARL16Q0P5N6 197 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 SLC10A1Q14973 349 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 TMEM164Q5U3C3 297 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 SLC35E3Q7Z769 313 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 WDR86Q86TI4 376 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 SCCPDHQ8NBX0 429 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 OR10G4Q8NGN3 311 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 NANOS1Q8WY41 292 aaKnown RBP12.9□□□□□ -0.34
DDX56-201ENST00000258772 RTL8AQ9BWD3 113 aa12.9□□□□□ -0.34
DDX56-201ENST00000258772 KLRC4-KLRK1H3BQV0 150 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 ATXN7O15265 892 aaPredicted RBP12.89□□□□□ -0.35
DDX56-201ENST00000258772 ERVK11-1P61568 191 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 ZNF343Q6P1L6 599 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 VASH2Q86V25 355 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 ZNF525Q8N782 197 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 UBALD1Q8TB05 177 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 Q8WTZ3 238 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 VSIRQ9H7M9 311 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 GSN-AS1Q9NRJ2 163 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 GNG13Q9P2W3 67 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 KLF13Q9Y2Y9 288 aaPredicted RBP12.89□□□□□ -0.35
DDX56-201ENST00000258772 URB1O60287 2271 aaKnown RBP12.89□□□□□ -0.35
DDX56-201ENST00000258772 CXorf65A6NEN9 183 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 WDR1O75083 606 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 FABP1P07148 127 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 CXCL1P09341 107 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 HAPLN4Q86UW8 402 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 Q8IYB0 196 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 PSMG3Q9BT73 122 aaPredicted RBP12.89□□□□□ -0.35
DDX56-201ENST00000258772 ARRDC1-AS1Q9H2J1 176 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 SIRT7Q9NRC8 400 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 MUC3AQ02505 3323 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 WDFY4Q6ZS81 3184 aa12.89□□□□□ -0.35
DDX56-201ENST00000258772 GTF3C1Q12789 2109 aa12.88□□□□□ -0.35
DDX56-201ENST00000258772 PPIHO43447 177 aaKnown RBP12.88□□□□□ -0.35
DDX56-201ENST00000258772 CD200P41217 278 aa12.88□□□□□ -0.35
DDX56-201ENST00000258772 GLIPR1P48060 266 aa12.88□□□□□ -0.35
DDX56-201ENST00000258772 ERVFRD-1P60508 538 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms