RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 URGCP-MRPS24S4R325 110 aa16.58■□□□□ 0.24
LAPTM4B-204ENST00000619747 METTL8Q9H825 291 aaKnown RBP16.57■□□□□ 0.24
LAPTM4B-204ENST00000619747 GSKIPQ9P0R6 139 aa16.57■□□□□ 0.24
LAPTM4B-204ENST00000619747 OR14J1Q9UGF5 321 aa16.57■□□□□ 0.24
LAPTM4B-204ENST00000619747 CD300LBA8K4G0 201 aa16.57■□□□□ 0.24
LAPTM4B-204ENST00000619747 IDH3GP51553 393 aaPredicted RBP16.57■□□□□ 0.24
LAPTM4B-204ENST00000619747 AKR1C8PQ5T2L2 129 aa16.57■□□□□ 0.24
LAPTM4B-204ENST00000619747 FAHD2BQ6P2I3 314 aaPredicted RBP16.57■□□□□ 0.24
LAPTM4B-204ENST00000619747 SLC22A25Q6T423 547 aa16.57■□□□□ 0.24
LAPTM4B-204ENST00000619747 FAHD2AQ96GK7 314 aa16.57■□□□□ 0.24
LAPTM4B-204ENST00000619747 YPEL4Q96NS1 127 aa16.57■□□□□ 0.24
LAPTM4B-204ENST00000619747 TAF9BQ9HBM6 251 aa16.57■□□□□ 0.24
LAPTM4B-204ENST00000619747 OR5AC2Q9NZP5 309 aa16.57■□□□□ 0.24
LAPTM4B-204ENST00000619747 SYNGR1O43759 233 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 HLA-GP17693 338 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 CD82P27701 267 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 NOVA1P51513 510 aaKnown RBP16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 RBM11P57052 281 aaKnown RBP16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 NKX6-1P78426 367 aaPredicted RBP16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 RHEBQ15382 184 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 TMEM208Q9BTX3 173 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 SFT2D2O95562 160 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 CXCL1P09341 107 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 CA6P23280 308 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 TAS2R31P59538 309 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 ERVS71-1P61550 626 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 DAZAP2Q15038 168 aaPredicted RBP16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 ARL6IP1Q15041 203 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 DNLZQ5SXM8 178 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 ASCL4Q6XD76 172 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 Q6ZPA2 131 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 ZDHHC23Q8IYP9 409 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 BCL2L2Q92843 193 aaPredicted RBP16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 MTCH1Q9NZJ7 389 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 LUZP4Q9P127 313 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 PUS1Q9Y606 427 aaKnown RBP eCLIP16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 KIAA2026Q5HYC2 2103 aa16.56■□□□□ 0.24
LAPTM4B-204ENST00000619747 OR13C7P0DN81 318 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 MAS1LP35410 378 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 CD81P60033 236 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 SP6Q3SY56 376 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 CACNA1DQ01668 2161 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 HEATR1Q9H583 2144 aaKnown RBP16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 GUK1Q16774 197 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 PEG10Q86TG7 708 aaKnown RBP16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 C17orf78Q8N4C9 275 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 OR10C1Q96KK4 312 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 PCNX1Q96RV3 2341 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 DLEU1O43261 78 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 TSPAN15O95858 294 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 TRGC2P03986 189 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 PTGER4P35408 488 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 SULT1A2P50226 295 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 NEK7Q8TDX7 302 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 PARP11Q9NR21 331 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 HSF4Q9ULV5 492 aa16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 C14orf166Q9Y224 244 aaKnown RBP16.55■□□□□ 0.24
LAPTM4B-204ENST00000619747 SMCO3A2RU48 225 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 PDCD6O75340 191 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 GGNBP1Q5YKI7 109 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 BEND2Q8NDZ0 799 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 HIST1H2AAQ96QV6 131 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 C19orf12Q9NSK7 152 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 POMT1Q9Y6A1 747 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 TRBV6-7A0A0A0MS04 114 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 PTBP3O95758 552 aaKnown RBP16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 IGHV1-2P23083 117 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 FCGR2CP31995 323 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 CEACAM21Q3KPI0 293 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 MIDNQ504T8 468 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 PHLDA2Q53GA4 152 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 PRSS33Q8NF86 280 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 OR5R1Q8NH85 324 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 SCGB3A2Q96PL1 93 aa16.54■□□□□ 0.24
LAPTM4B-204ENST00000619747 SMG1Q96Q15 3661 aaKnown RBP16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 CEACAM18A8MTB9 384 aa16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 SELEP16581 610 aa16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 FUT3P21217 361 aa16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 VWA1Q6PCB0 445 aa16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 Q8WTZ3 238 aa16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 NOL4LQ96MY1 436 aaPredicted RBP16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 PTPRBP23467 1997 aa16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 A6NNC1 897 aa16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 AGFG2O95081 481 aa16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 RPS2P15880 293 aaKnown RBP16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 RBMXP38159 391 aaKnown RBP16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 C4orf17Q53FE4 359 aa16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 R3HDM4Q96D70 268 aa16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 MUCL1Q96DR8 90 aa16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 FBXO7Q9Y3I1 522 aa16.53■□□□□ 0.24
LAPTM4B-204ENST00000619747 ZNF705GA8MUZ8 300 aaPredicted RBP16.52■□□□□ 0.24
LAPTM4B-204ENST00000619747 FGF7P21781 194 aa16.52■□□□□ 0.24
LAPTM4B-204ENST00000619747 FOXF2Q12947 444 aa16.52■□□□□ 0.24
LAPTM4B-204ENST00000619747 RTL6Q6ICC9 239 aa16.52■□□□□ 0.24
LAPTM4B-204ENST00000619747 THNSL2Q86YJ6 484 aa16.52■□□□□ 0.24
LAPTM4B-204ENST00000619747 GMPPAQ96IJ6 420 aaPredicted RBP16.52■□□□□ 0.24
LAPTM4B-204ENST00000619747 HIST1H2BLQ99880 126 aa16.52■□□□□ 0.24
LAPTM4B-204ENST00000619747 OR2J1Q9GZK6 312 aa16.52■□□□□ 0.24
LAPTM4B-204ENST00000619747 HS3ST1O14792 307 aa16.52■□□□□ 0.23
LAPTM4B-204ENST00000619747 TM4SF5O14894 197 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms