RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 PHYHIPLQ96FC7 376 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 BARX1Q9HBU1 254 aaPredicted RBP9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 MMP26Q9NRE1 261 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 LPAR3Q9UBY5 353 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 RRP8O43159 456 aaKnown RBP9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 ECI1P42126 302 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 NKX2-1P43699 371 aaPredicted RBP9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 CASP6P55212 293 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 FOXF2Q12947 444 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 MRPL49Q13405 166 aaKnown RBP9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 HERPUD1Q15011 391 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 DHRS11Q6UWP2 260 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 RFESDQ8TAC1 157 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 LOXL4Q96JB6 756 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 AQP10Q96PS8 301 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 TLN1Q9Y490 2541 aaKnown RBP9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 DOCK11Q5JSL3 2073 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 ZNF724A8MTY0 619 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 IGHV1-2P23083 117 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 OR8G1Q15617 311 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 AWAT1Q58HT5 328 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 PRAMEF6Q5VXH4 476 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 COLCA1Q6ZS62 124 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 OR5A2Q8NGI9 324 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 OR5P3Q8WZ94 311 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 SPSB4Q96A44 273 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 Q9N2K0 584 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 USF3Q68DE3 2245 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 A0A1W2PPE3 182 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 UMAD1C9J7I0 102 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 TIMM8AO60220 97 aaPredicted RBP9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 RBMXL2O75526 392 aaKnown RBP9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 ACAA1P09110 424 aaPredicted RBP9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 EDDM3AQ14507 147 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 HAGHQ16775 308 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 BCL2L2Q92843 193 aaPredicted RBP9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 MEGF10Q96KG7 1140 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 IGF2RP11717 2491 aa9.83□□□□□ -0.84
ARHGEF1-220ENST00000600274 E5RGE8 158 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 TERTO14746 1132 aaKnown RBP9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 GPR37O15354 613 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 IAPPP10997 89 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 MPV17P39210 176 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 ZNF528Q3MIS6 628 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 UQCC3Q6UW78 93 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 DLL3Q9NYJ7 618 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 NSG2Q9Y328 171 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 BORCS7-ASMTA0A0B4J1R7 106 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 TRAV24A0A0B4J272 114 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 IGKV1-6A0A0C4DH72 117 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 C7orf77A4D0Y5 90 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 C9JQL5 133 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 YIF1AO95070 293 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 DAZAP2Q15038 168 aaPredicted RBP9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 CLEC12BQ2HXU8 276 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 EIF4E3Q8N5X7 224 aaKnown RBP9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 MSI2Q96DH6 328 aaKnown RBP9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 TECTBQ96PL2 329 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 OPN3Q9H1Y3 402 aaPredicted RBP9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 SPTAN1Q13813 2472 aaKnown RBP9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 IGHV3-43A0A0B4J1X8 118 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 KIR2DS1A0A191URI9 304 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 DEFB108AA8MXU0 73 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 CDRT15L2A8MXV6 281 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 TRDCB7Z8K6 153 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 NDUFA2O43678 99 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 CA11O75493 328 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 IGHV3-43DP0DP04 118 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 S100A2P29034 98 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 KIR2DS4P43632 304 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 KIR2DS1Q14954 304 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 SCCPDHQ8NBX0 429 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 TCTEX1D2Q8WW35 142 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 RTL8AQ9BWD3 113 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 GSN-AS1Q9NRJ2 163 aa9.82□□□□□ -0.84
ARHGEF1-220ENST00000600274 TRBV6-7A0A0A0MS04 114 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 CST4P01036 141 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 PSG2P11465 335 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 TUBG1P23258 451 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 GABRA2P47869 451 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 RAB2AP61019 212 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 ZNF154Q13106 437 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 KIAA0141Q14154 515 aaPredicted RBP9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 ASCL4Q6XD76 172 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 C9orf106Q8NAJ2 232 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 POM121Q96HA1 1249 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 FAM234AQ9H0X4 552 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 WFDC1Q9HC57 220 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 TREM2Q9NZC2 230 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 ZNF727A8MUV8 499 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 ATXN7O15265 892 aaPredicted RBP9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 JTBO76095 146 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 OR2H2O95918 312 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 RUNX1Q01196 453 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 KRTAP27-1Q3LI81 207 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 DNAJB11Q9UBS4 358 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 S100GP29377 79 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 TMEM267Q0VDI3 215 aaPredicted RBP9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 PSG7Q13046 419 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 GUK1Q16774 197 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms