RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 C6orf183Q5T699 404 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 Q6ZSV7 163 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 Q8N2B8 174 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 ZNF439Q8NDP4 499 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 LINC01006Q8NI28 216 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 RFESDQ8TAC1 157 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 ARL11Q969Q4 196 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 ST6GALNAC6Q969X2 333 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 NEDD4LQ96PU5 975 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 URM1Q9BTM9 101 aaKnown RBP14.19□□□□□ -0.14
USHBP1-209ENST00000598570 FAAP24Q9BTP7 215 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 RIMS4Q9H426 269 aaPredicted RBP14.19□□□□□ -0.14
USHBP1-209ENST00000598570 GFOD1Q9NXC2 390 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 TCF19Q9Y242 345 aa14.19□□□□□ -0.14
USHBP1-209ENST00000598570 TMEM272A0A1B0GTI8 110 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 CLPSL1A2RUU4 121 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 SOCS1O15524 211 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 CRYBA1P05813 215 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 MDKP21741 143 aaPredicted RBP14.18□□□□□ -0.14
USHBP1-209ENST00000598570 MYL9P24844 172 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 BLVRBP30043 206 aaPredicted RBP14.18□□□□□ -0.14
USHBP1-209ENST00000598570 CEACAM3P40198 252 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 KIR2DS4P43632 304 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 ZNF137PP52743 207 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 HTD2P86397 168 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 TPTE2P1Q5T6R2 138 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 C6orf201Q7Z4U5 140 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 THNSL2Q86YJ6 484 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 TAF15Q92804 592 aaKnown RBP eCLIP14.18□□□□□ -0.14
USHBP1-209ENST00000598570 YIPF6Q96EC8 236 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 OCSTAMPQ9BR26 566 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 OR51E2Q9H255 320 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 RANBP3Q9H6Z4 567 aaPredicted RBP14.18□□□□□ -0.14
USHBP1-209ENST00000598570 BEX1Q9HBH7 125 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 RAB18Q9NP72 206 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 RAB9BQ9NP90 201 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 SSR3Q9UNL2 185 aa14.18□□□□□ -0.14
USHBP1-209ENST00000598570 UBE2QL1A1L167 161 aa14.17□□□□□ -0.14
USHBP1-209ENST00000598570 NOTOA8MTQ0 251 aa14.17□□□□□ -0.14
USHBP1-209ENST00000598570 TOR1AO14656 332 aa14.17□□□□□ -0.14
USHBP1-209ENST00000598570 CHST1O43916 411 aa14.17□□□□□ -0.14
USHBP1-209ENST00000598570 TMEM127O75204 238 aa14.17□□□□□ -0.14
USHBP1-209ENST00000598570 CD36P16671 472 aa14.17□□□□□ -0.14
USHBP1-209ENST00000598570 CLDN12P56749 244 aa14.17□□□□□ -0.14
USHBP1-209ENST00000598570 PROK1P58294 105 aa14.17□□□□□ -0.14
USHBP1-209ENST00000598570 PLA2G7Q13093 441 aa14.17□□□□□ -0.14
USHBP1-209ENST00000598570 OR4K15Q8NH41 348 aa14.17□□□□□ -0.14
USHBP1-209ENST00000598570 NEK7Q8TDX7 302 aa14.17□□□□□ -0.14
USHBP1-209ENST00000598570 CCDC107Q8WV48 283 aa14.17□□□□□ -0.14
USHBP1-209ENST00000598570 TNFRSF19Q9NS68 423 aa14.17□□□□□ -0.14
USHBP1-209ENST00000598570 TRAPPC2LQ9UL33 140 aa14.17□□□□□ -0.14
USHBP1-209ENST00000598570 KCNK7Q9Y2U2 307 aa14.17□□□□□ -0.14
USHBP1-209ENST00000598570 RAB27BO00194 218 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 HBZP02008 142 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 GADD45AP24522 165 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 NFYBP25208 207 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 RAB13P51153 203 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 SCAND1P57086 179 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 HMGN3Q15651 99 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 NEDD8Q15843 81 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 FAM189A2Q15884 450 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 PLAC9Q5JTB6 97 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 HES5Q5TA89 166 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 OLFML2AQ68BL7 652 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 SLC25A48Q6ZT89 311 aaKnown RBP14.16□□□□□ -0.14
USHBP1-209ENST00000598570 C3orf56Q8N813 242 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 OR56B1Q8NGI3 324 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 KCTD7Q96MP8 289 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 TAF9BQ9HBM6 251 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 HILPDAQ9Y5L2 63 aa14.16□□□□□ -0.14
USHBP1-209ENST00000598570 VWFP04275 2813 aa14.15□□□□□ -0.14
USHBP1-209ENST00000598570 SPINT2O43291 252 aa14.15□□□□□ -0.14
USHBP1-209ENST00000598570 ZNF134P52741 427 aa14.15□□□□□ -0.14
USHBP1-209ENST00000598570 EFNB2P52799 333 aa14.15□□□□□ -0.14
USHBP1-209ENST00000598570 ZNF816Q0VGE8 651 aaPredicted RBP14.15□□□□□ -0.14
USHBP1-209ENST00000598570 DHRS7BQ6IAN0 325 aaPredicted RBP14.15□□□□□ -0.14
USHBP1-209ENST00000598570 CCDC144NLQ6NUI1 221 aa14.15□□□□□ -0.14
USHBP1-209ENST00000598570 SHISA2Q6UWI4 295 aa14.15□□□□□ -0.14
USHBP1-209ENST00000598570 DTX3Q8N9I9 347 aa14.15□□□□□ -0.14
USHBP1-209ENST00000598570 NDNFQ8TB73 568 aa14.15□□□□□ -0.14
USHBP1-209ENST00000598570 CFHR4Q92496 578 aa14.15□□□□□ -0.14
USHBP1-209ENST00000598570 LIN7BQ9HAP6 207 aa14.15□□□□□ -0.14
USHBP1-209ENST00000598570 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.15□□□□□ -0.14
USHBP1-209ENST00000598570 PLEKHJ1Q9NW61 149 aa14.15□□□□□ -0.14
USHBP1-209ENST00000598570 PITPNC1Q9UKF7 332 aa14.15□□□□□ -0.14
USHBP1-209ENST00000598570 AMMECR1Q9Y4X0 333 aaPredicted RBP14.15□□□□□ -0.14
USHBP1-209ENST00000598570 A0A1W2PPI3 338 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 FAM172BPA6NC97 362 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 SDCBPO00560 298 aaPredicted RBP14.14□□□□□ -0.15
USHBP1-209ENST00000598570 YPEL1O60688 119 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 SDC2P34741 201 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 MADCAM1Q13477 382 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 EBI3Q14213 229 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 MORN2Q502X0 79 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 CT45A1Q5HYN5 189 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 FAM53AQ6NSI3 398 aaPredicted RBP14.14□□□□□ -0.15
USHBP1-209ENST00000598570 Q6ZTK2 550 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 MOB1BQ7L9L4 216 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 C16orf82Q7Z2V1 217 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 OR1L1Q8NH94 360 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms