RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 RCC1P18754 421 aaPredicted RBP11.75□□□□□ -0.53
VRK3-206ENST00000594090 MDKP21741 143 aaPredicted RBP11.75□□□□□ -0.53
VRK3-206ENST00000594090 GNG10P50151 68 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 DYNLT3P51808 116 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 PLA2G7Q13093 441 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 TRAT1Q6PIZ9 186 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 SLC16A12Q6ZSM3 486 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 OR52M1Q8NGK5 317 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 CREB3L1Q96BA8 519 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 KCTD7Q96MP8 289 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 LIN7BQ9HAP6 207 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 PLEKHJ1Q9NW61 149 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 PSG11Q9UQ72 335 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 AMMECR1Q9Y4X0 333 aaPredicted RBP11.75□□□□□ -0.53
VRK3-206ENST00000594090 A0A0B4J203 849 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 LOC100506127A0A0U1RQW1 187 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 FOXI3A8MTJ6 420 aaPredicted RBP11.74□□□□□ -0.53
VRK3-206ENST00000594090 NOTOA8MTQ0 251 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 CEACAM3P40198 252 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 VEGFCP49767 419 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 RAB13P51153 203 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 LIAT1Q6ZQX7 453 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 TPRA1Q86W33 373 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 C3orf56Q8N813 242 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 OR4F5Q8NH21 305 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 RNF167Q9H6Y7 350 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 RAB9BQ9NP90 201 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 GFOD1Q9NXC2 390 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 RAB22AQ9UL26 194 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 HSF4Q9ULV5 492 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 TCF19Q9Y242 345 aa11.74□□□□□ -0.53
VRK3-206ENST00000594090 IGHV3-43A0A0B4J1X8 118 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 LY6LH3BQJ8 138 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 SPINT2O43291 252 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 HBZP02008 142 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 IGHV3-43DP0DP04 118 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 RAB6AP20340 208 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 SDC2P34741 201 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 TMEM50BP56557 158 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 LOXL3P58215 753 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 TMEM30BQ3MIR4 351 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 TPTE2P1Q5T6R2 138 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 ZNF554Q86TJ5 538 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 PRR18Q8N4B5 295 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 OR56B1Q8NGI3 324 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 OR1L1Q8NH94 360 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 CENPOQ9BU64 300 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 TAF9BQ9HBM6 251 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 RAB18Q9NP72 206 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 MMP24Q9Y5R2 645 aa11.73□□□□□ -0.53
VRK3-206ENST00000594090 CHST1O43916 411 aa11.72□□□□□ -0.53
VRK3-206ENST00000594090 NAPSAO96009 420 aa11.72□□□□□ -0.53
VRK3-206ENST00000594090 SLC2A2P11168 524 aaPredicted RBP11.72□□□□□ -0.53
VRK3-206ENST00000594090 ARHGDIBP52566 201 aa11.72□□□□□ -0.53
VRK3-206ENST00000594090 EFNB2P52799 333 aa11.72□□□□□ -0.53
VRK3-206ENST00000594090 TIMM50Q3ZCQ8 353 aa11.72□□□□□ -0.53
VRK3-206ENST00000594090 Q3ZCU0 254 aa11.72□□□□□ -0.53
VRK3-206ENST00000594090 FAM53AQ6NSI3 398 aaPredicted RBP11.72□□□□□ -0.53
VRK3-206ENST00000594090 SFXN4Q6P4A7 337 aa11.72□□□□□ -0.53
VRK3-206ENST00000594090 Q6ZPA2 131 aa11.72□□□□□ -0.53
VRK3-206ENST00000594090 Q6ZSV7 163 aa11.72□□□□□ -0.53
VRK3-206ENST00000594090 YIPF6Q96EC8 236 aa11.72□□□□□ -0.53
VRK3-206ENST00000594090 ARHGAP5-AS1Q96IT6 56 aa11.72□□□□□ -0.53
VRK3-206ENST00000594090 PECRQ9BY49 303 aa11.72□□□□□ -0.53
VRK3-206ENST00000594090 BEX1Q9HBH7 125 aa11.72□□□□□ -0.53
VRK3-206ENST00000594090 CHMP1AQ9HD42 196 aaPredicted RBP11.72□□□□□ -0.53
VRK3-206ENST00000594090 KCNIP1Q9NZI2 227 aa11.72□□□□□ -0.53
VRK3-206ENST00000594090 AK3Q9UIJ7 227 aa11.72□□□□□ -0.53
VRK3-206ENST00000594090 A0A1B0GUS0 222 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 A0A1W2PPE3 182 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 A6NDX4 124 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 POM121CA8CG34 1229 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 OOSP1A8MZH6 123 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 TSPAN9O75954 239 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 MXD1Q05195 221 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 MADCAM1Q13477 382 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 HMGN3Q15651 99 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 PLAC9Q5JTB6 97 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 ZNF880Q6PDB4 577 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 CCBE1Q6UXH8 406 aaPredicted RBP11.71□□□□□ -0.53
VRK3-206ENST00000594090 Q6ZTK2 550 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 TMEM219Q86XT9 240 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 C8orf31Q8N9H6 132 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 OR10X1Q8NGY0 326 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 TOMM40LQ969M1 308 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 RPEQ96AT9 228 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 HDHD3Q9BSH5 251 aaPredicted RBP11.71□□□□□ -0.53
VRK3-206ENST00000594090 DAPK2Q9UIK4 370 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 PITPNC1Q9UKF7 332 aa11.71□□□□□ -0.53
VRK3-206ENST00000594090 TRBV6-6A0A0A6YYG2 114 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 CLPSL1A2RUU4 121 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 HAX1O00165 279 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 SMIM18P0DKX4 95 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 MOGAT2Q3SYC2 334 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 OLFML2AQ68BL7 652 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 CCDC144NLQ6NUI1 221 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 MOB1BQ7L9L4 216 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 C5orf24Q7Z6I8 188 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 LINC00311Q8N616 119 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 ZNF439Q8NDP4 499 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms