RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 LIMS4P0CW20 117 aa17.77■□□□□ 0.44
SSBP4-203ENST00000593641 Q3ZCU0 254 aa17.77■□□□□ 0.44
SSBP4-203ENST00000593641 ST6GALNAC6Q969X2 333 aa17.77■□□□□ 0.44
SSBP4-203ENST00000593641 S1PR3Q99500 378 aa17.77■□□□□ 0.44
SSBP4-203ENST00000593641 C9orf16Q9BUW7 83 aa17.77■□□□□ 0.44
SSBP4-203ENST00000593641 RAB9BQ9NP90 201 aa17.77■□□□□ 0.44
SSBP4-203ENST00000593641 SIRT4Q9Y6E7 314 aaPredicted RBP17.77■□□□□ 0.44
SSBP4-203ENST00000593641 LOC100130705A0A1B0GUX0 176 aa17.76■□□□□ 0.43
SSBP4-203ENST00000593641 GTF2F2P13984 249 aa17.76■□□□□ 0.43
SSBP4-203ENST00000593641 SLC22A6Q4U2R8 563 aa17.76■□□□□ 0.43
SSBP4-203ENST00000593641 XAF1Q6GPH4 301 aa17.76■□□□□ 0.43
SSBP4-203ENST00000593641 ZNF497Q6ZNH5 498 aa17.76■□□□□ 0.43
SSBP4-203ENST00000593641 RNF152Q8N8N0 203 aa17.76■□□□□ 0.43
SSBP4-203ENST00000593641 SPACA1Q9HBV2 294 aa17.76■□□□□ 0.43
SSBP4-203ENST00000593641 PLSCR3Q9NRY6 295 aa17.76■□□□□ 0.43
SSBP4-203ENST00000593641 GNG12Q9UBI6 72 aa17.76■□□□□ 0.43
SSBP4-203ENST00000593641 U3KQK5 164 aa17.76■□□□□ 0.43
SSBP4-203ENST00000593641 SEC14L6B5MCN3 397 aa17.75■□□□□ 0.43
SSBP4-203ENST00000593641 SOX6P35712 828 aa17.75■□□□□ 0.43
SSBP4-203ENST00000593641 RIPK1Q13546 671 aa17.75■□□□□ 0.43
SSBP4-203ENST00000593641 TMPRSS11AQ6ZMR5 421 aa17.75■□□□□ 0.43
SSBP4-203ENST00000593641 PRR25Q96S07 402 aa17.75■□□□□ 0.43
SSBP4-203ENST00000593641 ZNF184Q99676 751 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-203ENST00000593641 TRAPPC2LQ9UL33 140 aa17.75■□□□□ 0.43
SSBP4-203ENST00000593641 A0A1W2PP11 408 aa17.74■□□□□ 0.43
SSBP4-203ENST00000593641 ZNF736B4DX44 427 aaPredicted RBP17.74■□□□□ 0.43
SSBP4-203ENST00000593641 SPINT2O43291 252 aa17.74■□□□□ 0.43
SSBP4-203ENST00000593641 IGHG4P01861 327 aa17.74■□□□□ 0.43
SSBP4-203ENST00000593641 MT-ND4P03905 459 aa17.74■□□□□ 0.43
SSBP4-203ENST00000593641 OR5H8P0DN80 308 aa17.74■□□□□ 0.43
SSBP4-203ENST00000593641 ECI1P42126 302 aa17.74■□□□□ 0.43
SSBP4-203ENST00000593641 GPR176Q14439 515 aa17.74■□□□□ 0.43
SSBP4-203ENST00000593641 TMEM30BQ3MIR4 351 aa17.74■□□□□ 0.43
SSBP4-203ENST00000593641 FAM53AQ6NSI3 398 aaPredicted RBP17.74■□□□□ 0.43
SSBP4-203ENST00000593641 FAM71E2Q8N5Q1 922 aa17.74■□□□□ 0.43
SSBP4-203ENST00000593641 C4orf3Q8WVX3 66 aa17.74■□□□□ 0.43
SSBP4-203ENST00000593641 APH1BQ8WW43 257 aa17.74■□□□□ 0.43
SSBP4-203ENST00000593641 SMIM19Q96E16 107 aa17.74■□□□□ 0.43
SSBP4-203ENST00000593641 HSPB9Q9BQS6 159 aa17.74■□□□□ 0.43
SSBP4-203ENST00000593641 FGF20Q9NP95 211 aaPredicted RBP17.74■□□□□ 0.43
SSBP4-203ENST00000593641 CKLFQ9UBR5 152 aa17.74■□□□□ 0.43
SSBP4-203ENST00000593641 LSM4Q9Y4Z0 139 aaKnown RBP17.74■□□□□ 0.43
SSBP4-203ENST00000593641 STAB2Q8WWQ8 2551 aa17.74■□□□□ 0.43
SSBP4-203ENST00000593641 C12orf77C9JDV5 145 aa17.73■□□□□ 0.43
SSBP4-203ENST00000593641 SLC31A2O15432 143 aa17.73■□□□□ 0.43
SSBP4-203ENST00000593641 ZNF137PP52743 207 aa17.73■□□□□ 0.43
SSBP4-203ENST00000593641 CFHR3Q02985 330 aa17.73■□□□□ 0.43
SSBP4-203ENST00000593641 C6orf183Q5T699 404 aa17.73■□□□□ 0.43
SSBP4-203ENST00000593641 SYT6Q5T7P8 510 aaPredicted RBP17.73■□□□□ 0.43
SSBP4-203ENST00000593641 SLC25A48Q6ZT89 311 aaKnown RBP17.73■□□□□ 0.43
SSBP4-203ENST00000593641 PRR18Q8N4B5 295 aa17.73■□□□□ 0.43
SSBP4-203ENST00000593641 MCRIP1C9JLW8 97 aa17.72■□□□□ 0.43
SSBP4-203ENST00000593641 DCKP27707 260 aa17.72■□□□□ 0.43
SSBP4-203ENST00000593641 ETV1P50549 477 aa17.72■□□□□ 0.43
SSBP4-203ENST00000593641 F2RL1P55085 397 aa17.72■□□□□ 0.43
SSBP4-203ENST00000593641 OR2G6Q5TZ20 316 aa17.72■□□□□ 0.43
SSBP4-203ENST00000593641 TRAT1Q6PIZ9 186 aa17.72■□□□□ 0.43
SSBP4-203ENST00000593641 C10orf67Q8IYJ2 551 aa17.72■□□□□ 0.43
SSBP4-203ENST00000593641 OR10V1Q8NGI7 309 aa17.72■□□□□ 0.43
SSBP4-203ENST00000593641 ORAI1Q96D31 301 aa17.72■□□□□ 0.43
SSBP4-203ENST00000593641 KCTD7Q96MP8 289 aa17.72■□□□□ 0.43
SSBP4-203ENST00000593641 ETAA1Q9NY74 926 aa17.72■□□□□ 0.43
SSBP4-203ENST00000593641 ZNF107Q9UII5 783 aaPredicted RBP17.72■□□□□ 0.43
SSBP4-203ENST00000593641 IRGMA1A4Y4 181 aa17.71■□□□□ 0.43
SSBP4-203ENST00000593641 IGF1P05019 195 aa17.71■□□□□ 0.43
SSBP4-203ENST00000593641 MYL12AP19105 171 aa17.71■□□□□ 0.43
SSBP4-203ENST00000593641 PSMB8P28062 276 aa17.71■□□□□ 0.43
SSBP4-203ENST00000593641 ZNF439Q8NDP4 499 aa17.71■□□□□ 0.43
SSBP4-203ENST00000593641 OR13C5Q8NGS8 318 aa17.71■□□□□ 0.43
SSBP4-203ENST00000593641 OR4K15Q8NH41 348 aa17.71■□□□□ 0.43
SSBP4-203ENST00000593641 SLC29A1Q99808 456 aa17.71■□□□□ 0.43
SSBP4-203ENST00000593641 RCC2Q9P258 522 aaKnown RBP17.71■□□□□ 0.43
SSBP4-203ENST00000593641 ZNF580Q9UK33 172 aa17.71■□□□□ 0.43
SSBP4-203ENST00000593641 SLC2A2P11168 524 aaPredicted RBP17.7■□□□□ 0.42
SSBP4-203ENST00000593641 IGFBP3P17936 291 aaPredicted RBP17.7■□□□□ 0.42
SSBP4-203ENST00000593641 MYF6P23409 242 aa17.7■□□□□ 0.42
SSBP4-203ENST00000593641 FHL3Q13643 280 aa17.7■□□□□ 0.42
SSBP4-203ENST00000593641 MMDQ15546 238 aa17.7■□□□□ 0.42
SSBP4-203ENST00000593641 SMN1Q16637 294 aaKnown RBP17.7■□□□□ 0.42
SSBP4-203ENST00000593641 ZNF260Q3ZCT1 412 aa17.7■□□□□ 0.42
SSBP4-203ENST00000593641 CT45A1Q5HYN5 189 aa17.7■□□□□ 0.42
SSBP4-203ENST00000593641 OR11H1Q8NG94 326 aa17.7■□□□□ 0.42
SSBP4-203ENST00000593641 CT45A3Q8NHU0 189 aa17.7■□□□□ 0.42
SSBP4-203ENST00000593641 MRPS24Q96EL2 167 aaKnown RBP17.7■□□□□ 0.42
SSBP4-203ENST00000593641 BABAM2Q9NXR7 383 aa17.7■□□□□ 0.42
SSBP4-203ENST00000593641 MAGEA13PA6NCF6 341 aa17.69■□□□□ 0.42
SSBP4-203ENST00000593641 OGG1O15527 345 aa17.69■□□□□ 0.42
SSBP4-203ENST00000593641 HBZP02008 142 aa17.69■□□□□ 0.42
SSBP4-203ENST00000593641 ZNF134P52741 427 aa17.69■□□□□ 0.42
SSBP4-203ENST00000593641 LSAMPQ13449 338 aa17.69■□□□□ 0.42
SSBP4-203ENST00000593641 Q499Y3 187 aa17.69■□□□□ 0.42
SSBP4-203ENST00000593641 STEAP3Q658P3 488 aa17.69■□□□□ 0.42
SSBP4-203ENST00000593641 RAB12Q6IQ22 244 aa17.69■□□□□ 0.42
SSBP4-203ENST00000593641 JAGN1Q8N5M9 183 aa17.69■□□□□ 0.42
SSBP4-203ENST00000593641 ZNF555Q8NEP9 628 aa17.69■□□□□ 0.42
SSBP4-203ENST00000593641 OR1L1Q8NH94 360 aa17.69■□□□□ 0.42
SSBP4-203ENST00000593641 GHSRQ92847 366 aa17.69■□□□□ 0.42
SSBP4-203ENST00000593641 MUL1Q969V5 352 aa17.69■□□□□ 0.42
SSBP4-203ENST00000593641 CHCHD6Q9BRQ6 235 aa17.69■□□□□ 0.42
SSBP4-203ENST00000593641 SCOCQ9UIL1 159 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms