RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 RRP9O43818 475 aaKnown RBP18.76■□□□□ 0.59
LSM4-202ENST00000593564 ELANEP08246 267 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 IGHV3-43DP0DP04 118 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 VSIG8P0DPA2 414 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 GTF2F2P13984 249 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 DCKP27707 260 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 CDX1P47902 265 aaPredicted RBP18.76■□□□□ 0.59
LSM4-202ENST00000593564 ETV1P50549 477 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 ZNF137PP52743 207 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 RIPK1Q13546 671 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 KIR2DS1Q14954 304 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 SMN1Q16637 294 aaKnown RBP18.76■□□□□ 0.59
LSM4-202ENST00000593564 OR2G6Q5TZ20 316 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 C10orf67Q8IYJ2 551 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 STX19Q8N4C7 294 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 TFAP2CQ92754 450 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 SMIM19Q96E16 107 aa18.76■□□□□ 0.59
LSM4-202ENST00000593564 OGG1O15527 345 aa18.75■□□□□ 0.59
LSM4-202ENST00000593564 TXNL1O43396 289 aa18.75■□□□□ 0.59
LSM4-202ENST00000593564 WBP4O75554 376 aaKnown RBP18.75■□□□□ 0.59
LSM4-202ENST00000593564 IGFBP3P17936 291 aaPredicted RBP18.75■□□□□ 0.59
LSM4-202ENST00000593564 CFHR3Q02985 330 aa18.75■□□□□ 0.59
LSM4-202ENST00000593564 DEFB136Q30KP8 78 aa18.75■□□□□ 0.59
LSM4-202ENST00000593564 SLC22A6Q4U2R8 563 aa18.75■□□□□ 0.59
LSM4-202ENST00000593564 LCNL1Q6ZST4 164 aa18.75■□□□□ 0.59
LSM4-202ENST00000593564 ZNF439Q8NDP4 499 aa18.75■□□□□ 0.59
LSM4-202ENST00000593564 OR5M8Q8NGP6 311 aa18.75■□□□□ 0.59
LSM4-202ENST00000593564 ZNF184Q99676 751 aaPredicted RBP18.75■□□□□ 0.59
LSM4-202ENST00000593564 RASL11BQ9BPW5 248 aa18.75■□□□□ 0.59
LSM4-202ENST00000593564 SPACA1Q9HBV2 294 aa18.75■□□□□ 0.59
LSM4-202ENST00000593564 RCC2Q9P258 522 aaKnown RBP18.75■□□□□ 0.59
LSM4-202ENST00000593564 TRBV5-5A0A0J9YX44 114 aa18.74■□□□□ 0.59
LSM4-202ENST00000593564 ZNF736B4DX44 427 aaPredicted RBP18.74■□□□□ 0.59
LSM4-202ENST00000593564 C12orf77C9JDV5 145 aa18.74■□□□□ 0.59
LSM4-202ENST00000593564 SLC31A2O15432 143 aa18.74■□□□□ 0.59
LSM4-202ENST00000593564 GPR176Q14439 515 aa18.74■□□□□ 0.59
LSM4-202ENST00000593564 TMEM30BQ3MIR4 351 aa18.74■□□□□ 0.59
LSM4-202ENST00000593564 SLC25A48Q6ZT89 311 aaKnown RBP18.74■□□□□ 0.59
LSM4-202ENST00000593564 FAM71E2Q8N5Q1 922 aa18.74■□□□□ 0.59
LSM4-202ENST00000593564 ORAI1Q96D31 301 aa18.74■□□□□ 0.59
LSM4-202ENST00000593564 RAB9BQ9NP90 201 aa18.74■□□□□ 0.59
LSM4-202ENST00000593564 BABAM2Q9NXR7 383 aa18.74■□□□□ 0.59
LSM4-202ENST00000593564 GPX5O75715 221 aa18.73■□□□□ 0.59
LSM4-202ENST00000593564 IGHG4P01861 327 aa18.73■□□□□ 0.59
LSM4-202ENST00000593564 NHLRC4P0CG21 123 aaPredicted RBP18.73■□□□□ 0.59
LSM4-202ENST00000593564 LUMP51884 338 aaPredicted RBP18.73■□□□□ 0.59
LSM4-202ENST00000593564 OR13C5Q8NGS8 318 aa18.73■□□□□ 0.59
LSM4-202ENST00000593564 HSPB9Q9BQS6 159 aa18.73■□□□□ 0.59
LSM4-202ENST00000593564 GNG12Q9UBI6 72 aa18.73■□□□□ 0.59
LSM4-202ENST00000593564 ZNF580Q9UK33 172 aa18.73■□□□□ 0.59
LSM4-202ENST00000593564 IRGMA1A4Y4 181 aa18.72■□□□□ 0.59
LSM4-202ENST00000593564 MAGEA13PA6NCF6 341 aa18.72■□□□□ 0.59
LSM4-202ENST00000593564 SPINT2O43291 252 aa18.72■□□□□ 0.59
LSM4-202ENST00000593564 VDAC1P21796 283 aa18.72■□□□□ 0.59
LSM4-202ENST00000593564 SOX6P35712 828 aa18.72■□□□□ 0.59
LSM4-202ENST00000593564 C6orf183Q5T699 404 aa18.72■□□□□ 0.59
LSM4-202ENST00000593564 SYT6Q5T7P8 510 aaPredicted RBP18.72■□□□□ 0.59
LSM4-202ENST00000593564 C9orf66Q5T8R8 295 aa18.72■□□□□ 0.59
LSM4-202ENST00000593564 GAPTQ8N292 157 aa18.72■□□□□ 0.59
LSM4-202ENST00000593564 GHSRQ92847 366 aa18.72■□□□□ 0.59
LSM4-202ENST00000593564 MRPS24Q96EL2 167 aaKnown RBP18.72■□□□□ 0.59
LSM4-202ENST00000593564 CKLFQ9UBR5 152 aa18.72■□□□□ 0.59
LSM4-202ENST00000593564 TRAPPC2LQ9UL33 140 aa18.72■□□□□ 0.59
LSM4-202ENST00000593564 LSM4Q9Y4Z0 139 aaKnown RBP18.72■□□□□ 0.59
LSM4-202ENST00000593564 MCRIP1C9JLW8 97 aa18.71■□□□□ 0.59
LSM4-202ENST00000593564 LALBAP00709 142 aa18.71■□□□□ 0.59
LSM4-202ENST00000593564 IGF1P05019 195 aa18.71■□□□□ 0.59
LSM4-202ENST00000593564 FSTP19883 344 aa18.71■□□□□ 0.59
LSM4-202ENST00000593564 VHLP40337 213 aa18.71■□□□□ 0.59
LSM4-202ENST00000593564 ZNF134P52741 427 aa18.71■□□□□ 0.59
LSM4-202ENST00000593564 F2RL1P55085 397 aa18.71■□□□□ 0.59
LSM4-202ENST00000593564 Q499Y3 187 aa18.71■□□□□ 0.59
LSM4-202ENST00000593564 CT45A1Q5HYN5 189 aa18.71■□□□□ 0.59
LSM4-202ENST00000593564 DMKNQ6E0U4 476 aaPredicted RBP18.71■□□□□ 0.59
LSM4-202ENST00000593564 PQLC1Q8N2U9 271 aa18.71■□□□□ 0.59
LSM4-202ENST00000593564 CT45A3Q8NHU0 189 aa18.71■□□□□ 0.59
LSM4-202ENST00000593564 C4orf3Q8WVX3 66 aa18.71■□□□□ 0.59
LSM4-202ENST00000593564 S100A14Q9HCY8 104 aa18.71■□□□□ 0.59
LSM4-202ENST00000593564 ETAA1Q9NY74 926 aa18.71■□□□□ 0.59
LSM4-202ENST00000593564 DIMT1Q9UNQ2 313 aaKnown RBP18.71■□□□□ 0.59
LSM4-202ENST00000593564 EXOSC1Q9Y3B2 195 aaKnown RBP18.71■□□□□ 0.59
LSM4-202ENST00000593564 MYL12AP19105 171 aa18.7■□□□□ 0.58
LSM4-202ENST00000593564 PSMB8P28062 276 aa18.7■□□□□ 0.58
LSM4-202ENST00000593564 RPS11P62280 158 aaKnown RBP eCLIP18.7■□□□□ 0.58
LSM4-202ENST00000593564 FHL3Q13643 280 aa18.7■□□□□ 0.58
LSM4-202ENST00000593564 YIF1BQ5BJH7 314 aa18.7■□□□□ 0.58
LSM4-202ENST00000593564 STEAP3Q658P3 488 aa18.7■□□□□ 0.58
LSM4-202ENST00000593564 TRAT1Q6PIZ9 186 aa18.7■□□□□ 0.58
LSM4-202ENST00000593564 ZNF555Q8NEP9 628 aa18.7■□□□□ 0.58
LSM4-202ENST00000593564 OR10V1Q8NGI7 309 aa18.7■□□□□ 0.58
LSM4-202ENST00000593564 OR4K15Q8NH41 348 aa18.7■□□□□ 0.58
LSM4-202ENST00000593564 RDH12Q96NR8 316 aa18.7■□□□□ 0.58
LSM4-202ENST00000593564 MRPS28Q9Y2Q9 187 aaKnown RBP18.7■□□□□ 0.58
LSM4-202ENST00000593564 TRAV8-7A0A075B6U6 113 aa18.69■□□□□ 0.58
LSM4-202ENST00000593564 SEC14L6B5MCN3 397 aa18.69■□□□□ 0.58
LSM4-202ENST00000593564 CA11O75493 328 aa18.69■□□□□ 0.58
LSM4-202ENST00000593564 HBZP02008 142 aa18.69■□□□□ 0.58
LSM4-202ENST00000593564 OR5H8P0DN80 308 aa18.69■□□□□ 0.58
LSM4-202ENST00000593564 RAB12Q6IQ22 244 aa18.69■□□□□ 0.58
LSM4-202ENST00000593564 GLIPR1L1Q6UWM5 242 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms