RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 FAAP24Q9BTP7 215 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 MMP28Q9H239 520 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 RAB18Q9NP72 206 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 ABCB10Q9NRK6 738 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 KCNIP1Q9NZI2 227 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 PSG11Q9UQ72 335 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 AMMECR1Q9Y4X0 333 aaPredicted RBP9.62□□□□□ -0.87
LIG3-213ENST00000590630 HILPDAQ9Y5L2 63 aa9.62□□□□□ -0.87
LIG3-213ENST00000590630 FOXI3A8MTJ6 420 aaPredicted RBP9.61□□□□□ -0.87
LIG3-213ENST00000590630 BUB1B-PAK6H3BSN5 160 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 J3QR06 171 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 F2RL2O00254 374 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 SDCBPO00560 298 aaPredicted RBP9.61□□□□□ -0.87
LIG3-213ENST00000590630 SOCS1O15524 211 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 NDUFA7O95182 113 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 NAPSAO96009 420 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 RCC1P18754 421 aaPredicted RBP9.61□□□□□ -0.87
LIG3-213ENST00000590630 PAX6P26367 422 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 SDC2P34741 201 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 VEGFCP49767 419 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 LOXL3P58215 753 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 LTC4SQ16873 150 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 Q3ZCU0 254 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 AWAT1Q58HT5 328 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 DHRS7BQ6IAN0 325 aaPredicted RBP9.61□□□□□ -0.87
LIG3-213ENST00000590630 CCDC144NLQ6NUI1 221 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 MOB1BQ7L9L4 216 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 C8orf31Q8N9H6 132 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 OR4F5Q8NH21 305 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 PIFOQ8TCI5 191 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 CENPOQ9BU64 300 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 RIMS4Q9H426 269 aaPredicted RBP9.61□□□□□ -0.87
LIG3-213ENST00000590630 C1RLQ9NZP8 487 aa9.61□□□□□ -0.87
LIG3-213ENST00000590630 A0A1B0GUS0 222 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 SMIM30A4D0T7 59 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 METTL21EPA6NDL7 271 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 POM121CA8CG34 1229 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 OOSP1A8MZH6 123 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 LY6LH3BQJ8 138 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 HBZP02008 142 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 RAG2P55895 527 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 RELBQ01201 579 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 MADCAM1Q13477 382 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 PLA1AQ53H76 456 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 UTF1Q5T230 341 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 TPTE2P1Q5T6R2 138 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 SFXN4Q6P4A7 337 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 Q6ZTK2 550 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 PRR18Q8N4B5 295 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 LEAP2Q969E1 77 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 YIPF6Q96EC8 236 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 ARHGAP5-AS1Q96IT6 56 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 TAF9BQ9HBM6 251 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 C12orf4Q9NQ89 552 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 GFOD1Q9NXC2 390 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 GNG12Q9UBI6 72 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 PITPNC1Q9UKF7 332 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 TCF19Q9Y242 345 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 MMP24Q9Y5R2 645 aa9.6□□□□□ -0.87
LIG3-213ENST00000590630 TRBV6-6A0A0A6YYG2 114 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 A0A0B4J203 849 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 AIREO43918 545 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 TMEM127O75204 238 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 IGHV3-7P01780 117 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 SLC2A2P11168 524 aaPredicted RBP9.59□□□□□ -0.87
LIG3-213ENST00000590630 BRS3P32247 399 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 GNG10P50151 68 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 EFNB2P52799 333 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 TMEM50BP56557 158 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 SCAND1P57086 179 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 MXD1Q05195 221 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 PLA2G7Q13093 441 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 LY6EQ16553 131 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 PLAC9Q5JTB6 97 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 C3orf56Q8N813 242 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 OR10X1Q8NGY0 326 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 OR1L1Q8NH94 360 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 UBALD1Q8TB05 177 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 TOMM40LQ969M1 308 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 RPEQ96AT9 228 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 RAB3CQ96E17 227 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 CYYR1Q96J86 154 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 PECRQ9BY49 303 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 RNF167Q9H6Y7 350 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 BEX1Q9HBH7 125 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 CHMP1AQ9HD42 196 aaPredicted RBP9.59□□□□□ -0.87
LIG3-213ENST00000590630 AK3Q9UIJ7 227 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 DAPK2Q9UIK4 370 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 MGAT4AQ9UM21 535 aa9.59□□□□□ -0.87
LIG3-213ENST00000590630 RAB27BO00194 218 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 SMIM18P0DKX4 95 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 MNDAP41218 407 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 RAB7AP51149 207 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 RAB13P51153 203 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 HTD2P86397 168 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 HMGN3Q15651 99 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 STEAP3Q658P3 488 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 ZNF880Q6PDB4 577 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 CROCCP3Q8IVE0 287 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 LINC00311Q8N616 119 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms