RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 ARL6Q9H0F7 186 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 C16orf95Q9H693 158 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 TNFSF18Q9UNG2 199 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 TNFRSF18Q9Y5U5 241 aa6.33□□□□□ -1.4
SMAD4-209ENST00000589941 TRBV6-7A0A0A0MS04 114 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 ZNF816-ZNF321PA0A0X1KG74 233 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 RAB19A4D1S5 217 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 C17orf100A8MU93 164 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 DCTN6O00399 190 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 PRYO14603 147 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 ARPC5O15511 151 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 FGF16O43320 207 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 BCL2L11O43521 198 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 AKR7A3O95154 331 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 BGLAPP02818 100 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 PTHLHP12272 177 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 CBR1P16152 277 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 RAB3AP20336 220 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 DUSP1P28562 367 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 PRSS3P35030 304 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 RPL4P36578 427 aaKnown RBP6.32□□□□□ -1.4
SMAD4-209ENST00000589941 AQP2P41181 271 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 POU3F4P49335 361 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 EFNB2P52799 333 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 TAS2R19P59542 299 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 ERVS71-1P61550 626 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 CSNK2A1P68400 391 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-209ENST00000589941 FLI1Q01543 452 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-209ENST00000589941 GLO1Q04760 184 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 EGR4Q05215 589 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 BTN1A1Q13410 526 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 SLC17A1Q14916 467 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 HERPUD1Q15011 391 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 RAB11BQ15907 218 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 NSUN5P1Q3KNT7 163 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 MESTQ5EB52 335 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 WDR38Q5JTN6 314 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 C1orf100Q5SVJ3 147 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 LIN54Q6MZP7 749 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 FAAP20Q6NZ36 180 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 STEAP1BQ6NZ63 245 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 ALKAL2Q6UX46 152 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 MISPQ8IVT2 679 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 C12orf45Q8N5I9 185 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-209ENST00000589941 TMEM86BQ8N661 226 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 PXT1Q8NFP0 134 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 OR6K6Q8NGW6 343 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 OR10AC1Q8NH08 325 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 OTOSQ8NHW6 89 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 STOML3Q8TAV4 291 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 ZNF519Q8TB69 540 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 TMEM45BQ96B21 275 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 FAM3DQ96BQ1 224 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 SEH1LQ96EE3 360 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 INTS14Q96SY0 518 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 TM2D2Q9BX73 214 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 MFFQ9GZY8 342 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 UBQLN4Q9NRR5 601 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 ANAPC10Q9UM13 185 aa6.32□□□□□ -1.4
SMAD4-209ENST00000589941 FXYD6-FXYD2A0A087WZ82 144 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 IGLV1-36A0A0B4J1U3 117 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 ZNF587BE7ETH6 402 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 F5H0A9 414 aaPredicted RBP6.31□□□□□ -1.4
SMAD4-209ENST00000589941 F8VVB4 439 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 F8VWA3 439 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 GOSR2O14653 212 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 TSPAN9O75954 239 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 TNFRSF6BO95407 300 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 IGHV2-70P01814 119 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 RLN2P04090 185 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 CD3DP04234 171 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 ISG15P05161 165 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 OR4E1P0C645 316 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 GTF2F2P13984 249 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 HPGDP15428 266 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 ZBTB25P24278 435 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 RPL15P61313 204 aaKnown RBP6.31□□□□□ -1.4
SMAD4-209ENST00000589941 H3F3AP84243 136 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 RPL18Q07020 188 aaKnown RBP6.31□□□□□ -1.4
SMAD4-209ENST00000589941 PCK2Q16822 640 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 PNLIPRP3Q17RR3 467 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 ALG10Q5BKT4 473 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 ATPAF1Q5TC12 328 aaPredicted RBP6.31□□□□□ -1.4
SMAD4-209ENST00000589941 GLT8D1Q68CQ7 371 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 ZFAND6Q6FIF0 208 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 AAED1Q7RTV5 226 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 TMEM17Q86X19 198 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 ZNF679Q8IYX0 411 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 ZNF676Q8N7Q3 588 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 OR52L2PQ8NGH6 319 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 OR4D10Q8NGI6 311 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 OR51S1Q8NGJ8 323 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 OR6S1Q8NH40 331 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 COQ8AQ8NI60 647 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 NPIPB3Q92617 1050 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 RAB1CQ92928 201 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 TMEM106AQ96A25 262 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 TIMD4Q96H15 378 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 ELOVL1Q9BW60 279 aa6.31□□□□□ -1.4
SMAD4-209ENST00000589941 LAT2Q9GZY6 243 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms