RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 KCTD7Q96MP8 289 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 SSX3Q99909 188 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 FAAP24Q9BTP7 215 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 DPAGT1Q9H3H5 408 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 LIN7BQ9HAP6 207 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 C1RLQ9NZP8 487 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 SSR3Q9UNL2 185 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 LOC100506127A0A0U1RQW1 187 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 NOTOA8MTQ0 251 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 BUB1B-PAK6H3BSN5 160 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 H3BUI4 141 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 CHST1O43916 411 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 IGHV3-7P01780 117 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 GZMHP20718 246 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 NFYBP25208 207 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 HTR1DP28221 377 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 BLVRBP30043 206 aaPredicted RBP7.9□□□□□ -1.14
CLK3-220ENST00000567992 SDC2P34741 201 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 TGFBR1P36897 503 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 VEGFCP49767 419 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 DYNLT3P51808 116 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 RPL15P61313 204 aaKnown RBP7.9□□□□□ -1.14
CLK3-220ENST00000567992 SSX2Q16385 188 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 LTC4SQ16873 150 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 MOGAT2Q3SYC2 334 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 PLA1AQ53H76 456 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 FBLN7Q53RD9 439 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 SFXN4Q6P4A7 337 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 ZNF880Q6PDB4 577 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 TPRA1Q86W33 373 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 OR52M1Q8NGK5 317 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 OR9G1Q8NH87 305 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 OR1L1Q8NH94 360 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 ZNF596Q8TC21 504 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 GCDHQ92947 438 aaPredicted RBP7.9□□□□□ -1.14
CLK3-220ENST00000567992 ARL11Q969Q4 196 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 ARHGAP5-AS1Q96IT6 56 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 NEDD4LQ96PU5 975 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 URM1Q9BTM9 101 aaKnown RBP7.9□□□□□ -1.14
CLK3-220ENST00000567992 MMP28Q9H239 520 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 GFOD1Q9NXC2 390 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 RSL24D1Q9UHA3 163 aaKnown RBP7.9□□□□□ -1.14
CLK3-220ENST00000567992 AK3Q9UIJ7 227 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 HSF4Q9ULV5 492 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 PSG11Q9UQ72 335 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 HILPDAQ9Y5L2 63 aa7.9□□□□□ -1.14
CLK3-220ENST00000567992 PKD1L1Q8TDX9 2849 aa7.9□□□□□ -1.15
CLK3-220ENST00000567992 TRBV6-6A0A0A6YYG2 114 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 IGHV3-43A0A0B4J1X8 118 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 A0A1W2PPE3 182 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 J3QR06 171 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 RAB27BO00194 218 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 NDUFA7O95182 113 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 HBZP02008 142 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 IGHV3-43DP0DP04 118 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 RAB6AP20340 208 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 RAB13P51153 203 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 RAG2P55895 527 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 HMGN3Q15651 99 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 FAM189A2Q15884 450 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 LY6EQ16553 131 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 C6orf183Q5T699 404 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 TPTE2P1Q5T6R2 138 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 OLFML2AQ68BL7 652 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 CCBE1Q6UXH8 406 aaPredicted RBP7.89□□□□□ -1.15
CLK3-220ENST00000567992 GDPGP1Q6ZNW5 385 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 SLC16A12Q6ZSM3 486 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 ZNF554Q86TJ5 538 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 ZNF439Q8NDP4 499 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 OR13F1Q8NGS4 319 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 NDNFQ8TB73 568 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 PTX4Q96A99 478 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 HDHD3Q9BSH5 251 aaPredicted RBP7.89□□□□□ -1.15
CLK3-220ENST00000567992 PECRQ9BY49 303 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 TAF9BQ9HBM6 251 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 DPM3Q9P2X0 92 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 RAB22AQ9UL26 194 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 TRAPPC2LQ9UL33 140 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 TCF19Q9Y242 345 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 KCNK7Q9Y2U2 307 aa7.89□□□□□ -1.15
CLK3-220ENST00000567992 VWFP04275 2813 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 A6NDX4 124 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 BTBD17A6NE02 478 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 CCDC160A6NGH7 325 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 LEUTXA8MZ59 168 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 SDCBPO00560 298 aaPredicted RBP7.88□□□□□ -1.15
CLK3-220ENST00000567992 MFNGO00587 321 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 TOR1AO14656 332 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 SLC31A2O15432 143 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 AIREO43918 545 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 MDKP21741 143 aaPredicted RBP7.88□□□□□ -1.15
CLK3-220ENST00000567992 GNG10P50151 68 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 ZNF134P52741 427 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 PRRX1P54821 245 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 MXD1Q05195 221 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 FOXL1Q12952 345 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 DIAPH2-AS1Q14236 149 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 GNMTQ14749 295 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 TRAT1Q6PIZ9 186 aa7.88□□□□□ -1.15
CLK3-220ENST00000567992 Q6ZSV7 163 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms