RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 PRNTQ86SH4 94 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 ISOC2Q96AB3 205 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 SOSTQ9BQB4 213 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 DUSP15Q9H1R2 295 aaPredicted RBP11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 DEDDO75618 318 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 TEX30Q5JUR7 227 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 CLEC2AQ6UVW9 174 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 C9orf40Q8IXQ3 194 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 PARP11Q9NR21 331 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 WIPI2Q9Y4P8 454 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 DLK1P80370 383 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 SLC25A33Q9BSK2 321 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 HIGD1AQ9Y241 93 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 TCRBV16S1A1N1A0A5B0 115 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 COX6B1P14854 86 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 PRDX2P32119 198 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 KIR3DL2P43630 455 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 CLPPQ16740 277 aaPredicted RBP11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 TMEM251Q8N6I4 163 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 ZNF385AQ96PM9 386 aaKnown RBP11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 AURKAIP1Q9NWT8 199 aaPredicted RBP11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 KCNAB3O43448 404 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 ADRA2AP08913 450 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 SNRPCP09234 159 aaKnown RBP11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 NCMAPQ5T1S8 102 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 ADAD2Q8NCV1 583 aaKnown RBP11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 STXBP6Q8NFX7 210 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 PGLYRP3Q96LB9 341 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 CCL13Q99616 98 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 NEURL2Q9BR09 285 aa11.88□□□□□ -0.51
CX3CL1-204ENST00000565912 CXorf1O96002 111 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 IER3P46695 156 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 CEBPDP49716 269 aaPredicted RBP11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 TPRX1Q8N7U7 411 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 CD160O95971 181 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 TMEM50BP56557 158 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 FOXL2P58012 376 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 OPN3Q9H1Y3 402 aaPredicted RBP11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 CTDSPLO15194 276 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 PCMT1P22061 227 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 UCNP55089 124 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 C19orf57Q0VDD7 668 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 LRRC75BQ2VPJ9 315 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 GBGT1Q8N5D6 347 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 ZBTB34Q8NCN2 500 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 NFAM1Q8NET5 270 aaPredicted RBP11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 WDR54Q9H977 334 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 CHODLQ9H9P2 273 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 MBD1Q9UIS9 605 aaPredicted RBP11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 NUP205Q92621 2012 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 COX19Q49B96 90 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 RNF133Q8WVZ7 376 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 HDHD3Q9BSH5 251 aaPredicted RBP11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 FUT9Q9Y231 359 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 F5P12259 2224 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 SHROOM3Q8TF72 1996 aa11.87□□□□□ -0.51
CX3CL1-204ENST00000565912 OR4C45A6NMZ5 311 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 PDE6DO43924 150 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 APCSP02743 223 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 CLDN18P56856 261 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 ERVFRD-1P60508 538 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 DPPA3Q6W0C5 159 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 SLC25A42Q86VD7 318 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 TMEM204Q9BSN7 226 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 IFT22Q9H7X7 185 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 TRAV8-7A0A075B6U6 113 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 IGHV3OR16-12A0A075B7B8 117 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 LOC389332A0A1B0GUA5 103 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 VSIG8P0DPA2 414 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 GCSHP23434 173 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 EBLN2Q6P2I7 272 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 ZNF519Q8TB69 540 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 MIEN1Q9BRT3 115 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 CHST5Q9GZS9 411 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 IL17BQ9UHF5 180 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 SF3B6Q9Y3B4 125 aaKnown RBP11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 LY75O60449 1722 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 IGHV3-72A0A0B4J1Y9 119 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 A0A1B0GU03 582 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 OR4C46A6NHA9 309 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 CA11O75493 328 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 TCTAP57738 103 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 ISXQ2M1V0 245 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 RRN3P1Q2M238 152 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 LINC00596Q86U02 117 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 OR1N2Q8NGR9 330 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 ZNF714Q96N38 554 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 K7N7A8 449 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 KLF7O75840 302 aaPredicted RBP11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 PF4V1P10720 104 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 KLF9Q13886 244 aaPredicted RBP11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 SNX22Q96L94 193 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 NUDT16L1Q9BRJ7 211 aaKnown RBP11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 ANGPTL4Q9BY76 406 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 SNURFLB1AK76 121 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 AP4M1O00189 453 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 ISLRO14498 428 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 PGA4P0DJD7 388 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 PGA5P0DJD9 388 aa11.86□□□□□ -0.51
CX3CL1-204ENST00000565912 MUC15Q8N387 334 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms