RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 CYTH3O43739 400 aa0.84□□□□□ -2.27
CHD9-207ENST00000562806 ENSAO43768 121 aaKnown RBP0.84□□□□□ -2.27
CHD9-207ENST00000562806 CRYGDP07320 174 aa0.84□□□□□ -2.27
CHD9-207ENST00000562806 CD36P16671 472 aa0.84□□□□□ -2.27
CHD9-207ENST00000562806 ATF1P18846 271 aa0.84□□□□□ -2.27
CHD9-207ENST00000562806 EMP2P54851 167 aa0.84□□□□□ -2.27
CHD9-207ENST00000562806 TRAM1Q15629 374 aa0.84□□□□□ -2.27
CHD9-207ENST00000562806 LHFPL5Q8TAF8 219 aa0.84□□□□□ -2.27
CHD9-207ENST00000562806 EBNA1BP2Q99848 306 aaKnown RBP0.84□□□□□ -2.27
CHD9-207ENST00000562806 STMN3Q9NZ72 180 aa0.84□□□□□ -2.27
CHD9-207ENST00000562806 ALG5Q9Y673 324 aa0.84□□□□□ -2.27
CHD9-207ENST00000562806 AK9Q5TCS8 1911 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 GRIFINA4D1Z8 144 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 hCG_2039718K7EN88 272 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 FABP7O15540 132 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 SC5DO75845 299 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 IGKV5-2P06315 115 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 IGHV3-30-3P0DP02 117 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 GABRA3P34903 492 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 RAB2AP61019 212 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 CD164Q04900 197 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 MAPK14Q16539 360 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 MRPL52Q86TS9 123 aaKnown RBP0.83□□□□□ -2.28
CHD9-207ENST00000562806 FAM45AQ8TCE6 357 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 IFT81Q8WYA0 676 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 GOLPH3Q9H4A6 298 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 TMBIM4Q9HC24 238 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 BABAM2Q9NXR7 383 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 RABL2AQ9UBK7 228 aaPredicted RBP0.83□□□□□ -2.28
CHD9-207ENST00000562806 PUS1Q9Y606 427 aaKnown RBP eCLIP0.83□□□□□ -2.28
CHD9-207ENST00000562806 COL4A1P02462 1669 aa0.83□□□□□ -2.28
CHD9-207ENST00000562806 FCGBPQ9Y6R7 5405 aaPredicted RBP0.82□□□□□ -2.28
CHD9-207ENST00000562806 CR1P17927 2039 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 TRPM3Q9HCF6 1732 aaPredicted RBP0.82□□□□□ -2.28
CHD9-207ENST00000562806 K7EQS6 105 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 UBFD1O14562 309 aaKnown RBP0.82□□□□□ -2.28
CHD9-207ENST00000562806 NAPSAO96009 420 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 PTNP21246 168 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 CCNOP22674 350 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 ATP6V0CP27449 155 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 ACTR1BP42025 376 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 OR2B6P58173 313 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 SLC35A2P78381 396 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 RELAQ04206 551 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 PDK2Q15119 407 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 ZBTB6Q15916 424 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 TRIML2Q8N7C3 387 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 ZNF321PQ8N8H1 164 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 OR9I1Q8NGQ6 314 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 OR10A6Q8NH74 314 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 C16orf78Q8WTQ4 265 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 OR52B2Q96RD2 323 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 PRSS27Q9BQR3 290 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 NAA38Q9BRA0 125 aaKnown RBP0.82□□□□□ -2.28
CHD9-207ENST00000562806 C1QTNF6Q9BXI9 259 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 C11orf49Q9H6J7 331 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 DOK5Q9P104 306 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 PRRC2BQ5JSZ5 2229 aaKnown RBP0.82□□□□□ -2.28
CHD9-207ENST00000562806 GBF1Q92538 1859 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 TNIKQ9UKE5 1360 aa0.82□□□□□ -2.28
CHD9-207ENST00000562806 LCTP09848 1927 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 YLPM1P49750 1951 aaKnown RBP0.81□□□□□ -2.28
CHD9-207ENST00000562806 TRGV2A0A075B6R0 118 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 IGHV3-73A0A0B4J1V6 119 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 ARRDC5A6NEK1 342 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 TMEM235A6NFC5 223 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 B4DEV8 164 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 H3BPC8 53 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 CDIPTO14735 213 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 CTSEP14091 401 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 PSMA1P25786 263 aaKnown RBP0.81□□□□□ -2.28
CHD9-207ENST00000562806 CD200P41217 278 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 GABARAPL2P60520 117 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 SKP2Q13309 424 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 BSXQ3C1V8 233 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 FAM201AQ5SY85 155 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 C6orf183Q5T699 404 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 ZNF283Q8N7M2 679 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 RNF133Q8WVZ7 376 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 ZNF625Q96I27 306 aaPredicted RBP0.81□□□□□ -2.28
CHD9-207ENST00000562806 MGLLQ99685 303 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 UPK3BQ9BT76 320 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 POTEKPQ9BYX7 375 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 XKR8Q9H6D3 395 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 HAUS4Q9H6D7 363 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 COMMD9Q9P000 198 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 MINOS1-NBL1R4GNA1 71 aa0.81□□□□□ -2.28
CHD9-207ENST00000562806 PXDNLA1KZ92 1463 aa0.8□□□□□ -2.28
CHD9-207ENST00000562806 IGKV1-12A0A0C4DH73 117 aa0.8□□□□□ -2.28
CHD9-207ENST00000562806 IGKV1D-12P01611 117 aa0.8□□□□□ -2.28
CHD9-207ENST00000562806 SLC25A16P16260 332 aa0.8□□□□□ -2.28
CHD9-207ENST00000562806 RCVRNP35243 200 aa0.8□□□□□ -2.28
CHD9-207ENST00000562806 HINT1P49773 126 aaPredicted RBP0.8□□□□□ -2.28
CHD9-207ENST00000562806 MRPL51Q4U2R6 128 aaKnown RBP0.8□□□□□ -2.28
CHD9-207ENST00000562806 HENMT1Q5T8I9 393 aaKnown RBP0.8□□□□□ -2.28
CHD9-207ENST00000562806 Q6ZT83 130 aa0.8□□□□□ -2.28
CHD9-207ENST00000562806 FAM19A3Q7Z5A8 133 aa0.8□□□□□ -2.28
CHD9-207ENST00000562806 MTERF4Q7Z6M4 381 aaKnown RBP0.8□□□□□ -2.28
CHD9-207ENST00000562806 ST13P4Q8IZP2 240 aaPredicted RBP0.8□□□□□ -2.28
CHD9-207ENST00000562806 OR2AE1Q8NHA4 323 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms