RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ST20-AS1Q8NBB2 130 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 INO80EQ8NBZ0 244 aaPredicted RBP1.5□□□□□ -2.17
VRK1-202ENST00000553683 APCDD1LQ8NCL9 501 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 OR2Z1Q8NG97 314 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 OR4K5Q8NGD3 323 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 OR56A4Q8NGH8 313 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 OR1P1Q8NH06 330 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 OR8U1Q8NH10 309 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 ITFG1Q8TB96 612 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 GPR151Q8TDV0 419 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 ASB17Q8WXJ9 295 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 BAALCQ8WXS3 180 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 TMEM203Q969S6 136 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 C12orf43Q96C57 262 aaKnown RBP1.5□□□□□ -2.17
VRK1-202ENST00000553683 FLYWCH2Q96CP2 140 aaKnown RBP1.5□□□□□ -2.17
VRK1-202ENST00000553683 ZHX1-C8orf76Q96EF9 292 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 VAT1Q99536 393 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 CDCA4Q9BXL8 241 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 BEX2Q9BXY8 128 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 MS4A8Q9BY19 250 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 UGT2B28Q9BY64 529 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 MROQ9BYG7 248 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 SYT4Q9H2B2 425 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.5□□□□□ -2.17
VRK1-202ENST00000553683 DDIT4Q9NX09 232 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 RASL12Q9NYN1 266 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 JPT1Q9UK76 154 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 FBXO5Q9UKT4 447 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 HHLA2Q9UM44 414 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 SNX24Q9Y343 169 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 KCNE3Q9Y6H6 103 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 HSPE1-MOB4S4R3N1 261 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 ANKRD12Q6UB98 2062 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 BPTFQ12830 3046 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 ANKRD17O75179 2603 aaKnown RBP1.5□□□□□ -2.17
VRK1-202ENST00000553683 NLRC5Q86WI3 1866 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 KALRNO60229 2985 aa1.5□□□□□ -2.17
VRK1-202ENST00000553683 CCDC144AA2RUR9 1427 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 ZNF609O15014 1411 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 ATRNO75882 1429 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 PRG4Q92954 1404 aaPredicted RBP1.49□□□□□ -2.17
VRK1-202ENST00000553683 ADGBQ8N7X0 1667 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 MROH7Q68CQ1 1323 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 ADGRA3Q8IWK6 1321 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 A0A0A6YYD5 115 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 CENPVL3A0A0U1RRI6 287 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 VPS37CA5D8V6 355 aaPredicted RBP1.49□□□□□ -2.17
VRK1-202ENST00000553683 OR6C6A6NF89 314 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 OR5H14A6NHG9 310 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 ZNF878C9JN71 531 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 K7EN84 100 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 DNASE2O00115 360 aaPredicted RBP1.49□□□□□ -2.17
VRK1-202ENST00000553683 CYB5BO43169 146 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 RAD1O60671 282 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 HPGDSO60760 199 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 CNIH1O95406 144 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 HAND1O96004 215 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 OXTP01178 125 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 HLA-AP01891 365 aaKnown RBP1.49□□□□□ -2.17
VRK1-202ENST00000553683 HLA-HP01893 362 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 C1QBP02746 253 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 IFNW1P05000 195 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 ARG1P05089 322 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 C8GP07360 202 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 BPGMP07738 259 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 OR10J4P0C629 311 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 ZNF806P0C7X5 589 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 HIST1H1EP10412 219 aaKnown RBP1.49□□□□□ -2.17
VRK1-202ENST00000553683 HIST1H1CP16403 213 aaKnown RBP1.49□□□□□ -2.17
VRK1-202ENST00000553683 BCKDHBP21953 392 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 PSMA1P25786 263 aaKnown RBP1.49□□□□□ -2.17
VRK1-202ENST00000553683 DDTP30046 118 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 DNASE1L1P49184 302 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 RAB7AP51149 207 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 CLDN12P56749 244 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 OR10A3P58181 314 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 TAS2R41P59536 307 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 DYNLL1P63167 89 aaKnown RBP1.49□□□□□ -2.17
VRK1-202ENST00000553683 EMX1Q04741 257 aaPredicted RBP1.49□□□□□ -2.17
VRK1-202ENST00000553683 TWF1Q12792 350 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 BTN1A1Q13410 526 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 MAD2L1BPQ15013 274 aaPredicted RBP1.49□□□□□ -2.17
VRK1-202ENST00000553683 RGNQ15493 299 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 OR1Q1Q15612 314 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 GABRA6Q16445 453 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 TAF9Q16594 264 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 ORMDL2Q53FV1 153 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 ACTL10Q5JWF8 245 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 C22orf42Q6IC83 251 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 CD200R1LQ6Q8B3 271 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 TMEM205Q6UW68 189 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 FAM131AQ6UXB0 335 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 FBXW12Q6X9E4 464 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 ZNF767PQ75MW2 155 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 OLIG3Q7RTU3 272 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 GLT6D1Q7Z4J2 308 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 ZNF547Q8IVP9 402 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 ZBTB8OSQ8IWT0 167 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 C9orf62Q8N4C0 152 aa1.49□□□□□ -2.17
VRK1-202ENST00000553683 EIF4E3Q8N5X7 224 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms