RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 PLSCR3Q9NRY6 295 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 C14orf105Q9NVL8 296 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 PCYOX1Q9UHG3 505 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 GLS2Q9UI32 602 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 PSG8Q9UQ74 426 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 SIGLEC7Q9Y286 467 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 SLC25A15Q9Y619 301 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 UBR1Q8IWV7 1749 aa3.23□□□□□ -1.89
USP44-208ENST00000552440 YTHDC2Q9H6S0 1430 aaKnown RBP3.23□□□□□ -1.89
USP44-208ENST00000552440 FER1L5A0AVI2 2057 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 PREX2Q70Z35 1606 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 A0A087WW49 117 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 A0A0J9YXV3 536 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 DLEU1O43261 78 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 CCDC22O60826 627 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 SERPINB7O75635 380 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 DHRS3O75911 302 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 OR2A4O95047 310 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 C1QBP02746 253 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 PRTN3P24158 256 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 DDTP30046 118 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 PSMB2P49721 201 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 DSCR9P59020 149 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 TAS2R46P59540 309 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 DEFA6Q01524 100 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 PRDX4Q13162 271 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 TMEM236Q5W0B7 351 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 LCN12Q6JVE5 192 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 ZNF420Q8TAQ5 688 aaPredicted RBP3.22□□□□□ -1.89
USP44-208ENST00000552440 DNAJC9Q8WXX5 260 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 CCL17Q92583 94 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 ZNF689Q96CS4 500 aaPredicted RBP3.22□□□□□ -1.89
USP44-208ENST00000552440 OR2A7Q96R45 310 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 EBF4Q9BQW3 602 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 VPS25Q9BRG1 176 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 CCDC32Q9BV29 185 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 CLEC7AQ9BXN2 247 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 GABARAPL3Q9BY60 117 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 GNB1LQ9BYB4 327 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 SLC25A31Q9H0C2 315 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 RNASE7Q9H1E1 156 aaKnown RBP3.22□□□□□ -1.89
USP44-208ENST00000552440 PARLQ9H300 379 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 EDA2RQ9HAV5 297 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 RBFOX1Q9NWB1 397 aaKnown RBP3.22□□□□□ -1.89
USP44-208ENST00000552440 PRNDQ9UKY0 176 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 BTRCQ9Y297 605 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 TRIP12Q14669 1992 aaPredicted RBP3.22□□□□□ -1.89
USP44-208ENST00000552440 ARHGAP31Q2M1Z3 1444 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 SYCP2Q9BX26 1530 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 GPATCH8Q9UKJ3 1502 aaKnown RBP3.22□□□□□ -1.89
USP44-208ENST00000552440 ADGBQ8N7X0 1667 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 TMEM131Q92545 1883 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 VWA8A3KMH1 1905 aa3.22□□□□□ -1.89
USP44-208ENST00000552440 TRAV9-2A0A087WT02 112 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 FAM236DA0A1B0GTK5 79 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 GMNCA6NCL1 334 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 H3BP45 60 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 UPK2O00526 184 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 NTN3O00634 580 aaPredicted RBP3.21□□□□□ -1.89
USP44-208ENST00000552440 HMGB3O15347 200 aaKnown RBP3.21□□□□□ -1.89
USP44-208ENST00000552440 FAM236CP0DP71 79 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 NELFEP18615 380 aaKnown RBP3.21□□□□□ -1.89
USP44-208ENST00000552440 MARK3P27448 753 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 GLRXP35754 106 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 MAP2K4P45985 399 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 TBPL1P62380 186 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 CDK5Q00535 292 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 NSDHLQ15738 373 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 AKR1C8PQ5T2L2 129 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 ATAD3CQ5T2N8 411 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 C9orf57Q5W0N0 161 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 FBXW9Q5XUX1 488 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 REG3GQ6UW15 175 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 OOSP2Q86WS3 158 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 NUP37Q8NFH4 326 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 SPACA5Q96QH8 159 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 EFCAB11Q9BUY7 163 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 C1orf50Q9BV19 199 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 OCR1Q9BZK8 76 aa3.21□□□□□ -1.89
USP44-208ENST00000552440 TRMT112Q9UI30 125 aaKnown RBP3.21□□□□□ -1.89
USP44-208ENST00000552440 RTL9Q8NET4 1388 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 A0A1B0GV50 99 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 OR5H1A6NKK0 313 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 PSPHP1O15172 72 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 KIF1BO60333 1816 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 PFDN1O60925 122 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 MMP23AO75900 390 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 ZFAND5O76080 213 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 SLIT2O94813 1529 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 CA2P00918 260 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 HTR1AP08908 422 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 FBP1P09467 338 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 KLK2P20151 261 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 IL2RGP31785 369 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 PHBP35232 272 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 P2RX1P51575 399 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 SLC18A1P54219 525 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 CCL23P55773 120 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 DNAJB13P59910 316 aa3.21□□□□□ -1.9
USP44-208ENST00000552440 GNG5P63218 68 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms