RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 ASCL3Q9NQ33 180 aa15□□□□□ -0.01
SCARB1-208ENST00000544327 TUBG2Q9NRH3 451 aa15□□□□□ -0.01
SCARB1-208ENST00000544327 KNTC1P50748 2209 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 C1QTNF9BB2RNN3 333 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 C3orf80F5H4A9 247 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 SIRPB1O00241 398 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 LYZL6O75951 148 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 IGKV3-15P01624 115 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 PRH1P02810 166 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 CEACAM1P13688 526 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 PAX6P26367 422 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 ATP6V0CP27449 155 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 PAX9P55771 341 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 PSG7Q13046 419 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 VASH2Q86V25 355 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 OR1J1Q8NGS3 322 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 PCNX2A6NKB5 2137 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 KIAA1324LA8MWY0 1029 aaPredicted RBP14.99□□□□□ -0.01
SCARB1-208ENST00000544327 HSPA12AO43301 675 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 GALR2O43603 387 aaPredicted RBP14.99□□□□□ -0.01
SCARB1-208ENST00000544327 CHST1O43916 411 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 NXPH2O95156 264 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 SERPINE2P07093 398 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 CD200P41217 278 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 FHITP49789 147 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 TMEM182Q6ZP80 229 aaPredicted RBP14.99□□□□□ -0.01
SCARB1-208ENST00000544327 PBDC1Q9BVG4 233 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 SMDT1Q9H4I9 107 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 PRELID3BQ9Y3B1 194 aa14.99□□□□□ -0.01
SCARB1-208ENST00000544327 FREM2Q5SZK8 3169 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 TRAV17A0A0B4J275 112 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 A0A0G2JRQ6 117 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 WRBO00258 174 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 CDIPTO14735 213 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 C1QL1O75973 258 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 FTH1P19P0C7X4 201 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 PSG2P11465 335 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 KIR2DL2P43627 348 aaPredicted RBP14.98□□□□□ -0.01
SCARB1-208ENST00000544327 CCL11P51671 97 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 DYNLT3P51808 116 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 CLINT1Q14677 625 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 ALKBH6Q3KRA9 238 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 FIP1L1Q6UN15 594 aaKnown RBP14.98□□□□□ -0.01
SCARB1-208ENST00000544327 GCNT2Q8N0V5 402 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 WDR31Q8NA23 367 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 OR5C1Q8NGR4 320 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 OR2G3Q8NGZ4 309 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 KLF14Q8TD94 323 aaPredicted RBP14.98□□□□□ -0.01
SCARB1-208ENST00000544327 GNPNAT1Q96EK6 184 aaPredicted RBP14.98□□□□□ -0.01
SCARB1-208ENST00000544327 HIPK2Q9H2X6 1198 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 TRAPPC2LQ9UL33 140 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 ARID1AO14497 2285 aa14.98□□□□□ -0.01
SCARB1-208ENST00000544327 ASCL1P50553 236 aa14.97□□□□□ -0.01
SCARB1-208ENST00000544327 SP5Q6BEB4 398 aaPredicted RBP14.97□□□□□ -0.01
SCARB1-208ENST00000544327 IGF2-ASQ6U949 168 aa14.97□□□□□ -0.01
SCARB1-208ENST00000544327 OR51H1Q8NH63 302 aa14.97□□□□□ -0.01
SCARB1-208ENST00000544327 IL1F10Q8WWZ1 152 aa14.97□□□□□ -0.01
SCARB1-208ENST00000544327 RAB40CQ96S21 281 aa14.97□□□□□ -0.01
SCARB1-208ENST00000544327 BTBD17A6NE02 478 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 PRR33A8MZF0 331 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 IGKV1-39P01597 117 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 IGKV1D-39P04432 117 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 NFYBP25208 207 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 MPV17P39210 176 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 PPT1P50897 306 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 FAM213BQ8TBF2 198 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 SARAFQ96BY9 339 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 ATP5SQ99766 215 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 SMCO4Q9NRQ5 59 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 LIN7CQ9NUP9 197 aaKnown RBP14.96□□□□□ -0.01
SCARB1-208ENST00000544327 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.96□□□□□ -0.01
SCARB1-208ENST00000544327 TXNL1O43396 289 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 NDUFA2O43678 99 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 TSPAN9O75954 239 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 HAND1O96004 215 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 OMGP23515 440 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 RPL23AP62750 156 aaKnown RBP14.96□□□□□ -0.01
SCARB1-208ENST00000544327 SRSF6Q13247 344 aaKnown RBP14.96□□□□□ -0.01
SCARB1-208ENST00000544327 DPPA3Q6W0C5 159 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 ZNF295-AS1Q8N0V1 137 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 C9orf106Q8NAJ2 232 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 DEFB124Q8NES8 71 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 OR10Z1Q8NGY1 313 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 TOLLIPQ9H0E2 274 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 WSB1Q9Y6I7 421 aa14.96□□□□□ -0.01
SCARB1-208ENST00000544327 TMEM30CPA0ZSE6 113 aa14.95□□□□□ -0.02
SCARB1-208ENST00000544327 H0YL77 283 aa14.95□□□□□ -0.02
SCARB1-208ENST00000544327 DFFBO76075 338 aa14.95□□□□□ -0.02
SCARB1-208ENST00000544327 KITLGP21583 273 aa14.95□□□□□ -0.02
SCARB1-208ENST00000544327 C11orf53Q8IXP5 236 aa14.95□□□□□ -0.02
SCARB1-208ENST00000544327 CXXC4Q9H2H0 198 aa14.95□□□□□ -0.02
SCARB1-208ENST00000544327 PARD6AQ9NPB6 346 aa14.95□□□□□ -0.02
SCARB1-208ENST00000544327 PRELID1Q9Y255 219 aa14.95□□□□□ -0.02
SCARB1-208ENST00000544327 TRAV39A0A0B4J263 110 aa14.94□□□□□ -0.02
SCARB1-208ENST00000544327 MLNRO43193 412 aa14.94□□□□□ -0.02
SCARB1-208ENST00000544327 CST7O76096 145 aa14.94□□□□□ -0.02
SCARB1-208ENST00000544327 HOXC12P31275 282 aa14.94□□□□□ -0.02
SCARB1-208ENST00000544327 PPP1CCP36873 323 aaKnown RBP14.94□□□□□ -0.02
SCARB1-208ENST00000544327 SULT1A1P50225 295 aa14.94□□□□□ -0.02
SCARB1-208ENST00000544327 ZNF585BQ52M93 769 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 793.7 ms