RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 PPP1R3CQ9UQK1 317 aa13.12□□□□□ -0.31
CDH20-203ENST00000538374 STRAPQ9Y3F4 350 aaKnown RBP13.12□□□□□ -0.31
CDH20-203ENST00000538374 TMEM56-RWDD3S4R434 201 aa13.12□□□□□ -0.31
CDH20-203ENST00000538374 TGIF2-C20orf24A0A0A6YYL0 155 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 SPAARA0A1B0GVQ0 90 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 TRAPPC2LH3BP13 241 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 MPV17LQ2QL34 196 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 ATP1A1-AS1Q5TC04 95 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 OR2T2Q6IF00 324 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 PCSK4Q6UW60 755 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 ZNF295-AS1Q8N0V1 137 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 CCDC54Q8NEL0 328 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 PRSS33Q8NF86 280 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 GPR146Q96CH1 333 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 RP1L1Q8IWN7 2480 aaPredicted RBP13.11□□□□□ -0.31
CDH20-203ENST00000538374 CNOT4O95628 575 aaKnown RBP13.11□□□□□ -0.31
CDH20-203ENST00000538374 TFF1P04155 84 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 CA6P23280 308 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 HMGN3Q15651 99 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 NUFIP2Q7Z417 695 aaKnown RBP13.11□□□□□ -0.31
CDH20-203ENST00000538374 ZDHHC23Q8IYP9 409 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 MIOXQ9UGB7 285 aa13.11□□□□□ -0.31
CDH20-203ENST00000538374 PRR33A8MZF0 331 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 SRP19P09132 144 aaKnown RBP13.1□□□□□ -0.31
CDH20-203ENST00000538374 CD82P27701 267 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 LHX2P50458 406 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 ERVFRD-1P60508 538 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 FGF12P61328 243 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 DLK1P80370 383 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 ARL16Q0P5N6 197 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 ICAM4Q14773 271 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 LCN15Q6UWW0 184 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 SSX7Q7RTT5 188 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 SPSB4Q96A44 273 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 ASCL3Q9NQ33 180 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 DMXL1Q9Y485 3027 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 TRAV24A0A0B4J272 114 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 ZFP92A6NM28 416 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 HMGB3O15347 200 aaKnown RBP13.1□□□□□ -0.31
CDH20-203ENST00000538374 IGHV2-5P01817 119 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 S100A9P06702 114 aaKnown RBP13.1□□□□□ -0.31
CDH20-203ENST00000538374 ID3Q02535 119 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 ZNF266Q14584 549 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 RNF212Q495C1 297 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 COLCA1Q6ZS62 124 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 RNASE11Q8TAA1 199 aaKnown RBP13.1□□□□□ -0.31
CDH20-203ENST00000538374 MRPL30Q8TCC3 161 aaKnown RBP13.1□□□□□ -0.31
CDH20-203ENST00000538374 Q8WTZ3 238 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 TTTY12Q9BZ98 90 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 PLSCR2Q9NRY7 297 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 GNG13Q9P2W3 67 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 PRSS50Q9UI38 385 aa13.1□□□□□ -0.31
CDH20-203ENST00000538374 PITX3O75364 302 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 METTL15P1P0C7V9 234 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 NDUFA6P56556 154 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 CLDN18P56856 261 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 UBE2KP61086 200 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 RIPPLY2Q5TAB7 128 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 GFI1BQ5VTD9 330 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 SLC25A24Q6NUK1 477 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 ZNF429Q86V71 674 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 CMTM1Q8IZ96 169 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 PRDM14Q9GZV8 571 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 CD300LBA8K4G0 201 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 VDAC1P21796 283 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 CEACAM21Q3KPI0 293 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 MKXQ8IYA7 352 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 COMMD1Q8N668 190 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 FER1L6-AS2Q96M78 137 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 ABI3Q9P2A4 366 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 RNF115Q9Y4L5 304 aa13.09□□□□□ -0.31
CDH20-203ENST00000538374 SIRPB1O00241 398 aa13.08□□□□□ -0.31
CDH20-203ENST00000538374 SCAF4O95104 1147 aaKnown RBP13.08□□□□□ -0.31
CDH20-203ENST00000538374 IGKV1-39P01597 117 aa13.08□□□□□ -0.31
CDH20-203ENST00000538374 IGKV1D-39P04432 117 aa13.08□□□□□ -0.31
CDH20-203ENST00000538374 WNT5AP41221 380 aa13.08□□□□□ -0.31
CDH20-203ENST00000538374 RAB5CP51148 216 aa13.08□□□□□ -0.31
CDH20-203ENST00000538374 RPL23AP62750 156 aaKnown RBP13.08□□□□□ -0.31
CDH20-203ENST00000538374 KIAA0141Q14154 515 aaPredicted RBP13.08□□□□□ -0.31
CDH20-203ENST00000538374 OR2B11Q5JQS5 317 aa13.08□□□□□ -0.31
CDH20-203ENST00000538374 AKR1C8PQ5T2L2 129 aa13.08□□□□□ -0.31
CDH20-203ENST00000538374 EDARADDQ8WWZ3 215 aa13.08□□□□□ -0.31
CDH20-203ENST00000538374 MUCL1Q96DR8 90 aa13.08□□□□□ -0.31
CDH20-203ENST00000538374 FAM86C1Q9NVL1 165 aa13.08□□□□□ -0.31
CDH20-203ENST00000538374 ZNF292O60281 2723 aa13.08□□□□□ -0.32
CDH20-203ENST00000538374 IFITM10A6NMD0 228 aa13.08□□□□□ -0.32
CDH20-203ENST00000538374 UCP1P25874 307 aa13.08□□□□□ -0.32
CDH20-203ENST00000538374 CEBPDP49716 269 aaPredicted RBP13.08□□□□□ -0.32
CDH20-203ENST00000538374 SOX8P57073 446 aa13.08□□□□□ -0.32
CDH20-203ENST00000538374 ZNF674Q2M3X9 581 aa13.08□□□□□ -0.32
CDH20-203ENST00000538374 C4orf17Q53FE4 359 aa13.08□□□□□ -0.32
CDH20-203ENST00000538374 HEPN1Q6WQI6 88 aa13.08□□□□□ -0.32
CDH20-203ENST00000538374 ZNF665Q9H7R5 613 aa13.08□□□□□ -0.32
CDH20-203ENST00000538374 ATP23Q9Y6H3 246 aa13.08□□□□□ -0.32
CDH20-203ENST00000538374 WSB1Q9Y6I7 421 aa13.08□□□□□ -0.32
CDH20-203ENST00000538374 TUSC2O75896 110 aa13.07□□□□□ -0.32
CDH20-203ENST00000538374 SLC34A2O95436 690 aa13.07□□□□□ -0.32
CDH20-203ENST00000538374 F2RP25116 425 aa13.07□□□□□ -0.32
CDH20-203ENST00000538374 PAX6P26367 422 aa13.07□□□□□ -0.32
CDH20-203ENST00000538374 ERVS71-1P61550 626 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms