RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 KLK15Q9H2R5 256 aa16.6■□□□□ 0.25
SSH3-211ENST00000534112 ZNF580Q9UK33 172 aa16.6■□□□□ 0.25
SSH3-211ENST00000534112 EPPK1P58107 5090 aaKnown RBP16.59■□□□□ 0.25
SSH3-211ENST00000534112 SNTNA6NMZ2 147 aa16.59■□□□□ 0.25
SSH3-211ENST00000534112 GEMIN2O14893 280 aaKnown RBP16.59■□□□□ 0.25
SSH3-211ENST00000534112 SLC31A2O15432 143 aa16.59■□□□□ 0.25
SSH3-211ENST00000534112 ORC5O43913 435 aa16.59■□□□□ 0.25
SSH3-211ENST00000534112 OR8U8P0C7N1 319 aa16.59■□□□□ 0.25
SSH3-211ENST00000534112 RBM11P57052 281 aaKnown RBP16.59■□□□□ 0.25
SSH3-211ENST00000534112 KIAA0141Q14154 515 aaPredicted RBP16.59■□□□□ 0.25
SSH3-211ENST00000534112 ASPHD1Q5U4P2 390 aa16.59■□□□□ 0.25
SSH3-211ENST00000534112 OR52N1Q8NH53 320 aa16.59■□□□□ 0.25
SSH3-211ENST00000534112 UBE2E2Q96LR5 201 aa16.59■□□□□ 0.25
SSH3-211ENST00000534112 GNB4Q9HAV0 340 aa16.59■□□□□ 0.25
SSH3-211ENST00000534112 TAS2R4Q9NYW5 299 aa16.59■□□□□ 0.25
SSH3-211ENST00000534112 AASSQ9UDR5 926 aa16.59■□□□□ 0.25
SSH3-211ENST00000534112 ING4Q9UNL4 249 aa16.59■□□□□ 0.25
SSH3-211ENST00000534112 I3L521 148 aa16.58■□□□□ 0.24
SSH3-211ENST00000534112 MT-ND4P03905 459 aa16.58■□□□□ 0.24
SSH3-211ENST00000534112 VHLP40337 213 aa16.58■□□□□ 0.24
SSH3-211ENST00000534112 SOX2P48431 317 aa16.58■□□□□ 0.24
SSH3-211ENST00000534112 MRPL28Q13084 256 aaKnown RBP16.58■□□□□ 0.24
SSH3-211ENST00000534112 Q3ZCU0 254 aa16.58■□□□□ 0.24
SSH3-211ENST00000534112 SLC25A48Q6ZT89 311 aaKnown RBP16.58■□□□□ 0.24
SSH3-211ENST00000534112 CHCHD6Q9BRQ6 235 aa16.58■□□□□ 0.24
SSH3-211ENST00000534112 METTL9Q9H1A3 318 aa16.58■□□□□ 0.24
SSH3-211ENST00000534112 IL36GQ9NZH8 169 aa16.58■□□□□ 0.24
SSH3-211ENST00000534112 ZNF107Q9UII5 783 aaPredicted RBP16.58■□□□□ 0.24
SSH3-211ENST00000534112 EI24O14681 340 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 TXNL1O43396 289 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 ALPLP05186 524 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 SLC2A2P11168 524 aaPredicted RBP16.57■□□□□ 0.24
SSH3-211ENST00000534112 ZNF134P52741 427 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 ZNF137PP52743 207 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 RUNX1Q01196 453 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 ZNF616Q08AN1 781 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 ATAD3CQ5T2N8 411 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 FAM27D1Q5T7N8 215 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 TMEM65Q6PI78 240 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 ZNF429Q86V71 674 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 ZNF491Q8N8L2 437 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 JAM3Q9BX67 310 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 ERVK13-1Q9NX77 482 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 VSIG4Q9Y279 399 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 WSB1Q9Y6I7 421 aa16.57■□□□□ 0.24
SSH3-211ENST00000534112 BAG2O95816 211 aa16.56■□□□□ 0.24
SSH3-211ENST00000534112 CSTBP04080 98 aaKnown RBP16.56■□□□□ 0.24
SSH3-211ENST00000534112 LYL1P12980 280 aa16.56■□□□□ 0.24
SSH3-211ENST00000534112 PPIFP30405 207 aaKnown RBP16.56■□□□□ 0.24
SSH3-211ENST00000534112 GBX2P52951 348 aaPredicted RBP16.56■□□□□ 0.24
SSH3-211ENST00000534112 CT45A1Q5HYN5 189 aa16.56■□□□□ 0.24
SSH3-211ENST00000534112 ZNF497Q6ZNH5 498 aa16.56■□□□□ 0.24
SSH3-211ENST00000534112 OVCH2Q7RTZ1 564 aa16.56■□□□□ 0.24
SSH3-211ENST00000534112 LINC00596Q86U02 117 aa16.56■□□□□ 0.24
SSH3-211ENST00000534112 CBR4Q8N4T8 237 aa16.56■□□□□ 0.24
SSH3-211ENST00000534112 ZNF439Q8NDP4 499 aa16.56■□□□□ 0.24
SSH3-211ENST00000534112 CT45A3Q8NHU0 189 aa16.56■□□□□ 0.24
SSH3-211ENST00000534112 RGP1Q92546 391 aaPredicted RBP16.56■□□□□ 0.24
SSH3-211ENST00000534112 OR5B12Q96R08 314 aa16.56■□□□□ 0.24
SSH3-211ENST00000534112 C9orf16Q9BUW7 83 aa16.56■□□□□ 0.24
SSH3-211ENST00000534112 G3V318 75 aa16.55■□□□□ 0.24
SSH3-211ENST00000534112 AIPO00170 330 aa16.55■□□□□ 0.24
SSH3-211ENST00000534112 FADS2O95864 444 aaKnown RBP16.55■□□□□ 0.24
SSH3-211ENST00000534112 SERPINA2P20848 420 aa16.55■□□□□ 0.24
SSH3-211ENST00000534112 MYF6P23409 242 aa16.55■□□□□ 0.24
SSH3-211ENST00000534112 ALDH3A2P51648 485 aa16.55■□□□□ 0.24
SSH3-211ENST00000534112 GNB1P62873 340 aa16.55■□□□□ 0.24
SSH3-211ENST00000534112 MPV17LQ2QL34 196 aa16.55■□□□□ 0.24
SSH3-211ENST00000534112 ZIK1Q3SY52 487 aaPredicted RBP16.55■□□□□ 0.24
SSH3-211ENST00000534112 NEK7Q8TDX7 302 aa16.55■□□□□ 0.24
SSH3-211ENST00000534112 DCUN1D4Q92564 292 aa16.55■□□□□ 0.24
SSH3-211ENST00000534112 GNG12Q9UBI6 72 aa16.55■□□□□ 0.24
SSH3-211ENST00000534112 ORC6Q9Y5N6 252 aa16.55■□□□□ 0.24
SSH3-211ENST00000534112 BIRC6Q9NR09 4857 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 C12orf77C9JDV5 145 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 SPINT2O43291 252 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 IGLV1-40P01703 118 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 CD2P06729 351 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 GABRB1P18505 474 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 ZNF93P35789 620 aaPredicted RBP16.54■□□□□ 0.24
SSH3-211ENST00000534112 GTF2A1P52655 376 aaPredicted RBP16.54■□□□□ 0.24
SSH3-211ENST00000534112 RCN1Q15293 331 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 MMDQ15546 238 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 STX19Q8N4C7 294 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 OR10V1Q8NGI7 309 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 GPR148Q8TDV2 347 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 S100A13Q99584 98 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 AMBNQ9NP70 447 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 ISYNA1Q9NPH2 558 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 TMEM138Q9NPI0 162 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 PAK1IP1Q9NWT1 392 aaPredicted RBP16.54■□□□□ 0.24
SSH3-211ENST00000534112 GAR1Q9NY12 217 aaKnown RBP16.54■□□□□ 0.24
SSH3-211ENST00000534112 DNAH1Q9P2D7 4330 aa16.54■□□□□ 0.24
SSH3-211ENST00000534112 FAM90A10PA6NDY2 464 aa16.53■□□□□ 0.24
SSH3-211ENST00000534112 OVOL1O14753 267 aa16.53■□□□□ 0.24
SSH3-211ENST00000534112 FRMD6-AS1P0C7T7 363 aa16.53■□□□□ 0.24
SSH3-211ENST00000534112 RAB9AP51151 201 aa16.53■□□□□ 0.24
SSH3-211ENST00000534112 LSAMPQ13449 338 aa16.53■□□□□ 0.24
SSH3-211ENST00000534112 SYT6Q5T7P8 510 aaPredicted RBP16.53■□□□□ 0.24
SSH3-211ENST00000534112 DDI2Q5TDH0 399 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms