RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 RCC1P18754 421 aaPredicted RBP16.47■□□□□ 0.23
CCS-208ENST00000533244 BLVRBP30043 206 aaPredicted RBP16.47■□□□□ 0.23
CCS-208ENST00000533244 LTC4SQ16873 150 aa16.47■□□□□ 0.23
CCS-208ENST00000533244 C2orf76Q3KRA6 126 aa16.47■□□□□ 0.23
CCS-208ENST00000533244 ZNF554Q86TJ5 538 aa16.47■□□□□ 0.23
CCS-208ENST00000533244 LEAP2Q969E1 77 aa16.47■□□□□ 0.23
CCS-208ENST00000533244 OR51E2Q9H255 320 aa16.47■□□□□ 0.23
CCS-208ENST00000533244 C16orf95Q9H693 158 aa16.47■□□□□ 0.23
CCS-208ENST00000533244 ZNF696Q9H7X3 374 aa16.47■□□□□ 0.23
CCS-208ENST00000533244 BEX1Q9HBH7 125 aa16.47■□□□□ 0.23
CCS-208ENST00000533244 SSR3Q9UNL2 185 aa16.47■□□□□ 0.23
CCS-208ENST00000533244 A0A087WXM4 84 aa16.46■□□□□ 0.23
CCS-208ENST00000533244 A6NDX4 124 aa16.46■□□□□ 0.23
CCS-208ENST00000533244 SOCS1O15524 211 aa16.46■□□□□ 0.23
CCS-208ENST00000533244 CEACAM3P40198 252 aa16.46■□□□□ 0.23
CCS-208ENST00000533244 RAB13P51153 203 aa16.46■□□□□ 0.23
CCS-208ENST00000533244 TMEM30BQ3MIR4 351 aa16.46■□□□□ 0.23
CCS-208ENST00000533244 TPTE2P1Q5T6R2 138 aa16.46■□□□□ 0.23
CCS-208ENST00000533244 CCBE1Q6UXH8 406 aaPredicted RBP16.46■□□□□ 0.23
CCS-208ENST00000533244 TSPAN14Q8NG11 270 aa16.46■□□□□ 0.23
CCS-208ENST00000533244 FAAP24Q9BTP7 215 aa16.46■□□□□ 0.23
CCS-208ENST00000533244 ABCB10Q9NRK6 738 aa16.46■□□□□ 0.23
CCS-208ENST00000533244 GFOD1Q9NXC2 390 aa16.46■□□□□ 0.23
CCS-208ENST00000533244 TMEM272A0A1B0GTI8 110 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 CLPSL1A2RUU4 121 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 TRIM64CA6NLI5 447 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 OOSP1A8MZH6 123 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 CHST1O43916 411 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 NAPSAO96009 420 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 TMEM50BP56557 158 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 PLA2G7Q13093 441 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 Q3ZCU0 254 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 C8orf31Q8N9H6 132 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 LINC01006Q8NI28 216 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 UBALD1Q8TB05 177 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 RAB18Q9NP72 206 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 RAB9BQ9NP90 201 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 HSF4Q9ULV5 492 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 AMMECR1Q9Y4X0 333 aaPredicted RBP16.45■□□□□ 0.22
CCS-208ENST00000533244 SDCBPO00560 298 aaPredicted RBP16.45■□□□□ 0.22
CCS-208ENST00000533244 SPINT2O43291 252 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 IGHV3-7P01780 117 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 HBZP02008 142 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 CD36P16671 472 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 GADD45AP24522 165 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 OLFML2AQ68BL7 652 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 Q6ZPA2 131 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 TPRA1Q86W33 373 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 LINC00311Q8N616 119 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 PITPNC1Q9UKF7 332 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 RAB22AQ9UL26 194 aa16.45■□□□□ 0.22
CCS-208ENST00000533244 GNG10P50151 68 aa16.44■□□□□ 0.22
CCS-208ENST00000533244 FAM53AQ6NSI3 398 aaPredicted RBP16.44■□□□□ 0.22
CCS-208ENST00000533244 ZNF880Q6PDB4 577 aa16.44■□□□□ 0.22
CCS-208ENST00000533244 OR1L1Q8NH94 360 aa16.44■□□□□ 0.22
CCS-208ENST00000533244 CHCHD6Q9BRQ6 235 aa16.44■□□□□ 0.22
CCS-208ENST00000533244 RANBP3Q9H6Z4 567 aaPredicted RBP16.44■□□□□ 0.22
CCS-208ENST00000533244 LIN7BQ9HAP6 207 aa16.44■□□□□ 0.22
CCS-208ENST00000533244 TAF9BQ9HBM6 251 aa16.44■□□□□ 0.22
CCS-208ENST00000533244 PLEKHJ1Q9NW61 149 aa16.44■□□□□ 0.22
CCS-208ENST00000533244 TRBV6-6A0A0A6YYG2 114 aa16.43■□□□□ 0.22
CCS-208ENST00000533244 NOTOA8MTQ0 251 aa16.43■□□□□ 0.22
CCS-208ENST00000533244 RAB6AP20340 208 aa16.43■□□□□ 0.22
CCS-208ENST00000533244 VEGFCP49767 419 aa16.43■□□□□ 0.22
CCS-208ENST00000533244 PROK1P58294 105 aa16.43■□□□□ 0.22
CCS-208ENST00000533244 CCDC144NLQ6NUI1 221 aa16.43■□□□□ 0.22
CCS-208ENST00000533244 ZNF439Q8NDP4 499 aa16.43■□□□□ 0.22
CCS-208ENST00000533244 OR56B1Q8NGI3 324 aa16.43■□□□□ 0.22
CCS-208ENST00000533244 WFDC12Q8WWY7 111 aa16.43■□□□□ 0.22
CCS-208ENST00000533244 KCTD7Q96MP8 289 aa16.43■□□□□ 0.22
CCS-208ENST00000533244 IGHV3-43A0A0B4J1X8 118 aa16.42■□□□□ 0.22
CCS-208ENST00000533244 IGHV3-43DP0DP04 118 aa16.42■□□□□ 0.22
CCS-208ENST00000533244 ARHGDIBP52566 201 aa16.42■□□□□ 0.22
CCS-208ENST00000533244 EFNB2P52799 333 aa16.42■□□□□ 0.22
CCS-208ENST00000533244 MADCAM1Q13477 382 aa16.42■□□□□ 0.22
CCS-208ENST00000533244 HMGN3Q15651 99 aa16.42■□□□□ 0.22
CCS-208ENST00000533244 PLAC9Q5JTB6 97 aa16.42■□□□□ 0.22
CCS-208ENST00000533244 SHISA2Q6UWI4 295 aa16.42■□□□□ 0.22
CCS-208ENST00000533244 PTX4Q96A99 478 aa16.42■□□□□ 0.22
CCS-208ENST00000533244 ARHGAP5-AS1Q96IT6 56 aa16.42■□□□□ 0.22
CCS-208ENST00000533244 RIMS4Q9H426 269 aaPredicted RBP16.42■□□□□ 0.22
CCS-208ENST00000533244 RNF167Q9H6Y7 350 aa16.42■□□□□ 0.22
CCS-208ENST00000533244 KCNIP1Q9NZI2 227 aa16.42■□□□□ 0.22
CCS-208ENST00000533244 AK3Q9UIJ7 227 aa16.42■□□□□ 0.22
CCS-208ENST00000533244 A0A0B4J203 849 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 A0A1W2PPE3 182 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 A0A1W2PPI3 338 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 SMIM30A4D0T7 59 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 HAX1O00165 279 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 SLC2A2P11168 524 aaPredicted RBP16.41■□□□□ 0.22
CCS-208ENST00000533244 BRS3P32247 399 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 SDC2P34741 201 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 KIR2DS4P43632 304 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 HTD2P86397 168 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 Q6ZTK2 550 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 TMEM219Q86XT9 240 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 PRR18Q8N4B5 295 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 TOMM40LQ969M1 308 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 RPEQ96AT9 228 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 YIPF6Q96EC8 236 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms