RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 KRTAP10-3P60369 221 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 TPTE2P1Q5T6R2 138 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 SLC16A12Q6ZSM3 486 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 KCNG3Q8TAE7 436 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 ARL11Q969Q4 196 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 FUNDC2Q9BWH2 189 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 TMEM59Q9BXS4 323 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 KCNK15Q9H427 330 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 FBLN5Q9UBX5 448 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 PSG11Q9UQ72 335 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 AK6Q9Y3D8 172 aaKnown RBP12.36□□□□□ -0.43
CPSF1-210ENST00000532935 AMMECR1Q9Y4X0 333 aaPredicted RBP12.36□□□□□ -0.43
CPSF1-210ENST00000532935 VWFP04275 2813 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 MGAM2Q2M2H8 2515 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 UBE2QL1A1L167 161 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 SLC17A2O00624 439 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 ORC5O43913 435 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 CA11O75493 328 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 GABARAPO95166 117 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 BPNT1O95861 308 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 GNG10P50151 68 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 ARHGDIBP52566 201 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 RPS27AP62979 156 aaKnown RBP12.35□□□□□ -0.43
CPSF1-210ENST00000532935 QRFPP83859 136 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 UNC119Q13432 240 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 TIMM50Q3ZCQ8 353 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 GAPTQ8N292 157 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 OR4K15Q8NH41 348 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 UBALD1Q8TB05 177 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 CYYR1Q96J86 154 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 PLGRKTQ9HBL7 147 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 NDUFB11Q9NX14 153 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 TRAPPC2LQ9UL33 140 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 SIGLEC9Q9Y336 463 aa12.35□□□□□ -0.43
CPSF1-210ENST00000532935 TMEM14DPA8MWL7 114 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 OOSP1A8MZH6 123 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 C12orf77C9JDV5 145 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 H3BMQ9 156 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 CHATP28329 748 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 BRS3P32247 399 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 P2RY14Q15391 338 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 NKAPLQ5M9Q1 402 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 PRR31Q5SQ13 230 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 C6orf183Q5T699 404 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 CCDC144NLQ6NUI1 221 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 DTX3Q8N9I9 347 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 OR52M1Q8NGK5 317 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 OR2T6Q8NHC8 308 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 NEDD4LQ96PU5 975 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 TM2D1Q9BX74 207 aa12.34□□□□□ -0.43
CPSF1-210ENST00000532935 TET2Q6N021 2002 aaPredicted RBP12.33□□□□□ -0.43
CPSF1-210ENST00000532935 CCRL2O00421 344 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 SDCBPO00560 298 aaPredicted RBP12.33□□□□□ -0.44
CPSF1-210ENST00000532935 ARSBP15848 533 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 CD36P16671 472 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 RCC1P18754 421 aaPredicted RBP12.33□□□□□ -0.44
CPSF1-210ENST00000532935 CD24P25063 80 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 EFNB2P52799 333 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 LOXL3P58215 753 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 MADCAM1Q13477 382 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 RAB11BQ15907 218 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 CD200R1LQ6Q8B3 271 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 TOMM40LQ969M1 308 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 RPEQ96AT9 228 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 TSC22D3Q99576 134 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 SULT4A1Q9BR01 284 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 NICN1Q9BSH3 213 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 ZNF702PQ9H963 129 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 RAB9BQ9NP90 201 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 GFOD1Q9NXC2 390 aa12.33□□□□□ -0.44
CPSF1-210ENST00000532935 A0A0A6YYD4 124 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 IGHV3-43A0A0B4J1X8 118 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 TRDV1A0A1B0GX56 115 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 A0A1W2PPE3 182 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 SPINT2O43291 252 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 IGHV3-43DP0DP04 118 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 MNDAP41218 407 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 PSMD7P51665 324 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 CTF1Q16619 201 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 FAM53AQ6NSI3 398 aaPredicted RBP12.32□□□□□ -0.44
CPSF1-210ENST00000532935 C11orf88Q6PI97 169 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 TRAT1Q6PIZ9 186 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 C16orf82Q7Z2V1 217 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 OR2W3Q7Z3T1 314 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 C6orf201Q7Z4U5 140 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 Q8N2B8 174 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 OR10X1Q8NGY0 326 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 MRPL30Q8TCC3 161 aaKnown RBP12.32□□□□□ -0.44
CPSF1-210ENST00000532935 FAAP24Q9BTP7 215 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 V9GY05 133 aa12.32□□□□□ -0.44
CPSF1-210ENST00000532935 TRAV1-2A0A0B4J238 106 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 HBZP02008 142 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 GALP22466 123 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 MYL9P24844 172 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 BLVRBP30043 206 aaPredicted RBP12.31□□□□□ -0.44
CPSF1-210ENST00000532935 CLDN12P56749 244 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 DIAPH2-AS1Q14236 149 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 HABP2Q14520 560 aaPredicted RBP12.31□□□□□ -0.44
CPSF1-210ENST00000532935 TMEM30BQ3MIR4 351 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 FBLN7Q53RD9 439 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms