RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 MADCAM1Q13477 382 aa16.79■□□□□ 0.28
TRAPPC9-215ENST00000524162 KCTD21Q4G0X4 260 aa16.79■□□□□ 0.28
TRAPPC9-215ENST00000524162 SYT6Q5T7P8 510 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC9-215ENST00000524162 ZNF773Q6PK81 442 aa16.79■□□□□ 0.28
TRAPPC9-215ENST00000524162 CCBE1Q6UXH8 406 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC9-215ENST00000524162 THNSL2Q86YJ6 484 aa16.79■□□□□ 0.28
TRAPPC9-215ENST00000524162 RFESDQ8TAC1 157 aa16.79■□□□□ 0.28
TRAPPC9-215ENST00000524162 AKR1E2Q96JD6 320 aa16.79■□□□□ 0.28
TRAPPC9-215ENST00000524162 NEDD4LQ96PU5 975 aa16.79■□□□□ 0.28
TRAPPC9-215ENST00000524162 URM1Q9BTM9 101 aaKnown RBP16.79■□□□□ 0.28
TRAPPC9-215ENST00000524162 LIN7BQ9HAP6 207 aa16.79■□□□□ 0.28
TRAPPC9-215ENST00000524162 PLGRKTQ9HBL7 147 aa16.79■□□□□ 0.28
TRAPPC9-215ENST00000524162 GFOD1Q9NXC2 390 aa16.79■□□□□ 0.28
TRAPPC9-215ENST00000524162 TRAPPC2LQ9UL33 140 aa16.79■□□□□ 0.28
TRAPPC9-215ENST00000524162 AK6Q9Y3D8 172 aaKnown RBP16.79■□□□□ 0.28
TRAPPC9-215ENST00000524162 SPINT2O43291 252 aa16.78■□□□□ 0.28
TRAPPC9-215ENST00000524162 FGF9P31371 208 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC9-215ENST00000524162 RAB7AP51149 207 aa16.78■□□□□ 0.28
TRAPPC9-215ENST00000524162 EFNB2P52799 333 aa16.78■□□□□ 0.28
TRAPPC9-215ENST00000524162 RAB11BQ15907 218 aa16.78■□□□□ 0.28
TRAPPC9-215ENST00000524162 OR8H3Q8N146 312 aa16.78■□□□□ 0.28
TRAPPC9-215ENST00000524162 OR2T6Q8NHC8 308 aa16.78■□□□□ 0.28
TRAPPC9-215ENST00000524162 OCSTAMPQ9BR26 566 aa16.78■□□□□ 0.28
TRAPPC9-215ENST00000524162 HSF4Q9ULV5 492 aa16.78■□□□□ 0.28
TRAPPC9-215ENST00000524162 FAM172BPA6NC97 362 aa16.77■□□□□ 0.28
TRAPPC9-215ENST00000524162 FAM90A9PA6NNJ1 464 aa16.77■□□□□ 0.28
TRAPPC9-215ENST00000524162 C12orf77C9JDV5 145 aa16.77■□□□□ 0.28
TRAPPC9-215ENST00000524162 PLA1AQ53H76 456 aa16.77■□□□□ 0.28
TRAPPC9-215ENST00000524162 LY6G6FQ5SQ64 297 aa16.77■□□□□ 0.28
TRAPPC9-215ENST00000524162 OR10K2Q6IF99 312 aa16.77■□□□□ 0.28
TRAPPC9-215ENST00000524162 RPEQ96AT9 228 aa16.77■□□□□ 0.28
TRAPPC9-215ENST00000524162 LPAR5Q9H1C0 372 aa16.77■□□□□ 0.28
TRAPPC9-215ENST00000524162 RIMS4Q9H426 269 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC9-215ENST00000524162 TRAV39A0A0B4J263 110 aa16.76■□□□□ 0.27
TRAPPC9-215ENST00000524162 SDCBPO00560 298 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC9-215ENST00000524162 LDLRAD4O15165 306 aa16.76■□□□□ 0.27
TRAPPC9-215ENST00000524162 ZNF137PP52743 207 aa16.76■□□□□ 0.27
TRAPPC9-215ENST00000524162 HABP2Q14520 560 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC9-215ENST00000524162 UTF1Q5T230 341 aa16.76■□□□□ 0.27
TRAPPC9-215ENST00000524162 MRPL30Q8TCC3 161 aaKnown RBP16.76■□□□□ 0.27
TRAPPC9-215ENST00000524162 CCDC107Q8WV48 283 aa16.76■□□□□ 0.27
TRAPPC9-215ENST00000524162 FAM3DQ96BQ1 224 aa16.76■□□□□ 0.27
TRAPPC9-215ENST00000524162 PRSS22Q9GZN4 317 aa16.76■□□□□ 0.27
TRAPPC9-215ENST00000524162 STEAP1Q9UHE8 339 aa16.76■□□□□ 0.27
TRAPPC9-215ENST00000524162 TRBV6-6A0A0A6YYG2 114 aa16.75■□□□□ 0.27
TRAPPC9-215ENST00000524162 FOXI3A8MTJ6 420 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC9-215ENST00000524162 TIMM23O14925 209 aa16.75■□□□□ 0.27
TRAPPC9-215ENST00000524162 NAPSAO96009 420 aa16.75■□□□□ 0.27
TRAPPC9-215ENST00000524162 MYL9P24844 172 aa16.75■□□□□ 0.27
TRAPPC9-215ENST00000524162 HTD2P86397 168 aa16.75■□□□□ 0.27
TRAPPC9-215ENST00000524162 ZNF816Q0VGE8 651 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC9-215ENST00000524162 OR10X1Q8NGY0 326 aa16.75■□□□□ 0.27
TRAPPC9-215ENST00000524162 OR4K15Q8NH41 348 aa16.75■□□□□ 0.27
TRAPPC9-215ENST00000524162 TOMM40LQ969M1 308 aa16.75■□□□□ 0.27
TRAPPC9-215ENST00000524162 SULT4A1Q9BR01 284 aa16.75■□□□□ 0.27
TRAPPC9-215ENST00000524162 KCNIP1Q9NZI2 227 aa16.75■□□□□ 0.27
TRAPPC9-215ENST00000524162 UBE2QL1A1L167 161 aa16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 IFITM5A6NNB3 132 aa16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 M0QZK8 103 aa16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 OR2F2O95006 317 aa16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 HBZP02008 142 aa16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 FAM106CPP0CH98 169 aa16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 RCC1P18754 421 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 BLVRBP30043 206 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 ZNF880Q6PDB4 577 aa16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 SLC25A48Q6ZT89 311 aaKnown RBP16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 MOB1BQ7L9L4 216 aa16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 ZNF439Q8NDP4 499 aa16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 PTX4Q96A99 478 aa16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 RBM14Q96PK6 669 aaKnown RBP16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 NICN1Q9BSH3 213 aa16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 ZNF702PQ9H963 129 aa16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 TAF9BQ9HBM6 251 aa16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 PLEKHJ1Q9NW61 149 aa16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 MGAT4AQ9UM21 535 aa16.74■□□□□ 0.27
TRAPPC9-215ENST00000524162 A0A1W2PPI3 338 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 TXNL1O43396 289 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 JUNBP17275 347 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 IL3RAP26951 378 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 PSMB9P28065 219 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 KRTAP10-3P60369 221 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 P2RY14Q15391 338 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 C2orf76Q3KRA6 126 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 NKAPLQ5M9Q1 402 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 C6orf201Q7Z4U5 140 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 TPRA1Q86W33 373 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 TMEM219Q86XT9 240 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 OR51D1Q8NGF3 324 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 LEAP2Q969E1 77 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 ST6GALNAC6Q969X2 333 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 JPT1Q9UK76 154 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 RAB22AQ9UL26 194 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 STUB1Q9UNE7 303 aa16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 TET2Q6N021 2002 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC9-215ENST00000524162 A0A0A6YYD4 124 aa16.72■□□□□ 0.27
TRAPPC9-215ENST00000524162 SHISA3A0PJX4 238 aa16.72■□□□□ 0.27
TRAPPC9-215ENST00000524162 GAPDHP04406 335 aaKnown RBP16.72■□□□□ 0.27
TRAPPC9-215ENST00000524162 RAB3BP20337 219 aa16.72■□□□□ 0.27
TRAPPC9-215ENST00000524162 RAB6AP20340 208 aa16.72■□□□□ 0.27
TRAPPC9-215ENST00000524162 GNG10P50151 68 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms