RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 C10orf67Q8IYJ2 551 aa16.37■□□□□ 0.21
PABPC1-218ENST00000521865 PRR18Q8N4B5 295 aa16.37■□□□□ 0.21
PABPC1-218ENST00000521865 C8orf31Q8N9H6 132 aa16.37■□□□□ 0.21
PABPC1-218ENST00000521865 APH1BQ8WW43 257 aa16.37■□□□□ 0.21
PABPC1-218ENST00000521865 S1PR3Q99500 378 aa16.37■□□□□ 0.21
PABPC1-218ENST00000521865 ZNF184Q99676 751 aaPredicted RBP16.37■□□□□ 0.21
PABPC1-218ENST00000521865 SLC29A1Q99808 456 aa16.37■□□□□ 0.21
PABPC1-218ENST00000521865 RAB9BQ9NP90 201 aa16.37■□□□□ 0.21
PABPC1-218ENST00000521865 COL7A1Q02388 2944 aa16.36■□□□□ 0.21
PABPC1-218ENST00000521865 ZNF736B4DX44 427 aaPredicted RBP16.36■□□□□ 0.21
PABPC1-218ENST00000521865 SLC31A2O15432 143 aa16.36■□□□□ 0.21
PABPC1-218ENST00000521865 SPINT2O43291 252 aa16.36■□□□□ 0.21
PABPC1-218ENST00000521865 MT-ND4P03905 459 aa16.36■□□□□ 0.21
PABPC1-218ENST00000521865 ELANEP08246 267 aa16.36■□□□□ 0.21
PABPC1-218ENST00000521865 ETV1P50549 477 aa16.36■□□□□ 0.21
PABPC1-218ENST00000521865 FOXE3Q13461 319 aa16.36■□□□□ 0.21
PABPC1-218ENST00000521865 SMN1Q16637 294 aaKnown RBP16.36■□□□□ 0.21
PABPC1-218ENST00000521865 C9orf66Q5T8R8 295 aa16.36■□□□□ 0.21
PABPC1-218ENST00000521865 ZNF497Q6ZNH5 498 aa16.36■□□□□ 0.21
PABPC1-218ENST00000521865 OR8H1Q8NGG4 311 aa16.36■□□□□ 0.21
PABPC1-218ENST00000521865 OR10V1Q8NGI7 309 aa16.36■□□□□ 0.21
PABPC1-218ENST00000521865 OR13C5Q8NGS8 318 aa16.36■□□□□ 0.21
PABPC1-218ENST00000521865 SPACA1Q9HBV2 294 aa16.36■□□□□ 0.21
PABPC1-218ENST00000521865 FGF20Q9NP95 211 aaPredicted RBP16.36■□□□□ 0.21
PABPC1-218ENST00000521865 CKLFQ9UBR5 152 aa16.36■□□□□ 0.21
PABPC1-218ENST00000521865 MCRIP1C9JLW8 97 aa16.35■□□□□ 0.21
PABPC1-218ENST00000521865 TXNL1O43396 289 aa16.35■□□□□ 0.21
PABPC1-218ENST00000521865 DCKP27707 260 aa16.35■□□□□ 0.21
PABPC1-218ENST00000521865 SOX6P35712 828 aa16.35■□□□□ 0.21
PABPC1-218ENST00000521865 CDX1P47902 265 aaPredicted RBP16.35■□□□□ 0.21
PABPC1-218ENST00000521865 GPR176Q14439 515 aa16.35■□□□□ 0.21
PABPC1-218ENST00000521865 KIR2DS1Q14954 304 aa16.35■□□□□ 0.21
PABPC1-218ENST00000521865 SYT6Q5T7P8 510 aaPredicted RBP16.35■□□□□ 0.21
PABPC1-218ENST00000521865 TMEM104Q8NE00 496 aa16.35■□□□□ 0.21
PABPC1-218ENST00000521865 ZNF555Q8NEP9 628 aa16.35■□□□□ 0.21
PABPC1-218ENST00000521865 ST6GALNAC6Q969X2 333 aa16.35■□□□□ 0.21
PABPC1-218ENST00000521865 SMIM19Q96E16 107 aa16.35■□□□□ 0.21
PABPC1-218ENST00000521865 PRR25Q96S07 402 aa16.35■□□□□ 0.21
PABPC1-218ENST00000521865 HSPB9Q9BQS6 159 aa16.35■□□□□ 0.21
PABPC1-218ENST00000521865 PLSCR3Q9NRY6 295 aa16.35■□□□□ 0.21
PABPC1-218ENST00000521865 BABAM2Q9NXR7 383 aa16.35■□□□□ 0.21
PABPC1-218ENST00000521865 ETAA1Q9NY74 926 aa16.35■□□□□ 0.21
PABPC1-218ENST00000521865 SIRT4Q9Y6E7 314 aaPredicted RBP16.35■□□□□ 0.21
PABPC1-218ENST00000521865 SEC14L6B5MCN3 397 aa16.34■□□□□ 0.21
PABPC1-218ENST00000521865 C12orf77C9JDV5 145 aa16.34■□□□□ 0.21
PABPC1-218ENST00000521865 NHLRC4P0CG21 123 aaPredicted RBP16.34■□□□□ 0.21
PABPC1-218ENST00000521865 MYL12AP19105 171 aa16.34■□□□□ 0.21
PABPC1-218ENST00000521865 ECI1P42126 302 aa16.34■□□□□ 0.21
PABPC1-218ENST00000521865 Q3ZCU0 254 aa16.34■□□□□ 0.21
PABPC1-218ENST00000521865 JAGN1Q8N5M9 183 aa16.34■□□□□ 0.21
PABPC1-218ENST00000521865 OR4K15Q8NH41 348 aa16.34■□□□□ 0.21
PABPC1-218ENST00000521865 RBMXL1Q96E39 390 aaKnown RBP16.34■□□□□ 0.21
PABPC1-218ENST00000521865 MYF6P23409 242 aa16.33■□□□□ 0.2
PABPC1-218ENST00000521865 F2RL1P55085 397 aa16.33■□□□□ 0.2
PABPC1-218ENST00000521865 C6orf183Q5T699 404 aa16.33■□□□□ 0.2
PABPC1-218ENST00000521865 RAB12Q6IQ22 244 aa16.33■□□□□ 0.2
PABPC1-218ENST00000521865 SLC25A48Q6ZT89 311 aaKnown RBP16.33■□□□□ 0.2
PABPC1-218ENST00000521865 GHSRQ92847 366 aa16.33■□□□□ 0.2
PABPC1-218ENST00000521865 MUL1Q969V5 352 aa16.33■□□□□ 0.2
PABPC1-218ENST00000521865 CHCHD3Q9NX63 227 aaKnown RBP16.33■□□□□ 0.2
PABPC1-218ENST00000521865 MRPS28Q9Y2Q9 187 aaKnown RBP16.33■□□□□ 0.2
PABPC1-218ENST00000521865 IRGMA1A4Y4 181 aa16.32■□□□□ 0.2
PABPC1-218ENST00000521865 MAGEA13PA6NCF6 341 aa16.32■□□□□ 0.2
PABPC1-218ENST00000521865 OGG1O15527 345 aa16.32■□□□□ 0.2
PABPC1-218ENST00000521865 WBP4O75554 376 aaKnown RBP16.32■□□□□ 0.2
PABPC1-218ENST00000521865 HBZP02008 142 aa16.32■□□□□ 0.2
PABPC1-218ENST00000521865 OR5H8P0DN80 308 aa16.32■□□□□ 0.2
PABPC1-218ENST00000521865 SLC2A2P11168 524 aaPredicted RBP16.32■□□□□ 0.2
PABPC1-218ENST00000521865 TMEM30BQ3MIR4 351 aa16.32■□□□□ 0.2
PABPC1-218ENST00000521865 CT45A1Q5HYN5 189 aa16.32■□□□□ 0.2
PABPC1-218ENST00000521865 GLIPR1L1Q6UWM5 242 aa16.32■□□□□ 0.2
PABPC1-218ENST00000521865 OR1L1Q8NH94 360 aa16.32■□□□□ 0.2
PABPC1-218ENST00000521865 CT45A3Q8NHU0 189 aa16.32■□□□□ 0.2
PABPC1-218ENST00000521865 C4orf3Q8WVX3 66 aa16.32■□□□□ 0.2
PABPC1-218ENST00000521865 KCTD7Q96MP8 289 aa16.32■□□□□ 0.2
PABPC1-218ENST00000521865 ZNF107Q9UII5 783 aaPredicted RBP16.32■□□□□ 0.2
PABPC1-218ENST00000521865 EXOSC1Q9Y3B2 195 aaKnown RBP16.32■□□□□ 0.2
PABPC1-218ENST00000521865 PEX16Q9Y5Y5 336 aa16.32■□□□□ 0.2
PABPC1-218ENST00000521865 U3KQK5 164 aa16.32■□□□□ 0.2
PABPC1-218ENST00000521865 TENM3Q9P273 2699 aa16.32■□□□□ 0.2
PABPC1-218ENST00000521865 A0A1W2PPK0 400 aa16.31■□□□□ 0.2
PABPC1-218ENST00000521865 IGHG4P01861 327 aa16.31■□□□□ 0.2
PABPC1-218ENST00000521865 IGFBP3P17936 291 aaPredicted RBP16.31■□□□□ 0.2
PABPC1-218ENST00000521865 ZNF134P52741 427 aa16.31■□□□□ 0.2
PABPC1-218ENST00000521865 MED21Q13503 144 aa16.31■□□□□ 0.2
PABPC1-218ENST00000521865 MMDQ15546 238 aa16.31■□□□□ 0.2
PABPC1-218ENST00000521865 Q499Y3 187 aa16.31■□□□□ 0.2
PABPC1-218ENST00000521865 AWAT2Q6E213 333 aa16.31■□□□□ 0.2
PABPC1-218ENST00000521865 TRAT1Q6PIZ9 186 aa16.31■□□□□ 0.2
PABPC1-218ENST00000521865 FAM71E2Q8N5Q1 922 aa16.31■□□□□ 0.2
PABPC1-218ENST00000521865 RNF152Q8N8N0 203 aa16.31■□□□□ 0.2
PABPC1-218ENST00000521865 ZNF439Q8NDP4 499 aa16.31■□□□□ 0.2
PABPC1-218ENST00000521865 S100A14Q9HCY8 104 aa16.31■□□□□ 0.2
PABPC1-218ENST00000521865 RCC2Q9P258 522 aaKnown RBP16.31■□□□□ 0.2
PABPC1-218ENST00000521865 TRBV5-5A0A0J9YX44 114 aa16.3■□□□□ 0.2
PABPC1-218ENST00000521865 LALBAP00709 142 aa16.3■□□□□ 0.2
PABPC1-218ENST00000521865 ZNF137PP52743 207 aa16.3■□□□□ 0.2
PABPC1-218ENST00000521865 CFHR3Q02985 330 aa16.3■□□□□ 0.2
PABPC1-218ENST00000521865 ZNF260Q3ZCT1 412 aa16.3■□□□□ 0.2
PABPC1-218ENST00000521865 YIF1BQ5BJH7 314 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms