RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 GTF2H4Q92759 462 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 CCDC136Q96JN2 1154 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 YPEL4Q96NS1 127 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 TMEM206Q9H813 350 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 PSTPIP2Q9H939 334 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 PFDN4Q9NQP4 134 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 BICRAQ9NZM4 1560 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 POLR1DQ9Y2S0 133 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 SNX8Q9Y5X2 465 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 CARMIL1Q5VZK9 1371 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 BCL9LQ86UU0 1499 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 TANC1Q9C0D5 1861 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 KALRNO60229 2985 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 SOGA1O94964 1423 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 TRAV38-1A0A0B4J264 116 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 IGHV1-58A0A0C4DH39 117 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 PRORSD1PA6NEY8 169 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 CFAP73A6NFT4 308 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 TXNDC9O14530 226 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 MYL12BO14950 172 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 NUPR1O60356 82 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 MYO1DO94832 1006 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 OR2F2O95006 317 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 IGHV1-69P01742 117 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 NMBP08949 121 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 SFTPCP11686 197 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 SERPINB10P48595 397 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 NAPAP54920 295 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 RPL10AP62906 217 aaKnown RBP-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 HTD2P86397 168 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 KLRB1Q12918 225 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 CUL4AQ13619 759 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 DEFB112Q30KQ8 113 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 GGTA1PQ4G0N0 100 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 NADK2Q4G0N4 442 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 TRAT1Q6PIZ9 186 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 C12orf54Q6X4T0 127 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 INO80EQ8NBZ0 244 aaPredicted RBP-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 OR10W1Q8NGF6 305 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 DQX1Q8TE96 717 aaKnown RBP-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 THRSPQ92748 146 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 STMN2Q93045 179 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 FAAP24Q9BTP7 215 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 ARV1Q9H2C2 271 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 GHITMQ9H3K2 345 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 C11orf1Q9H5F2 150 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 PRO0255Q9UI72 69 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 TBC1D24Q9ULP9 559 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 AP3M1Q9Y2T2 418 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 RBM7Q9Y580 266 aaKnown RBP-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 FLT4P35916 1363 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 KIF24Q5T7B8 1368 aa-2.9□□□□□ -2.87
SNORA40.16-201ENST00000517238 SMG1Q96Q15 3661 aaKnown RBP-2.91□□□□□ -2.87
SNORA40.16-201ENST00000517238 TRAV7A0A075B6U4 112 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 SDHDO14521 159 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 DHRS3O75911 302 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 CLIC3O95833 236 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 PPBPP02775 128 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 SCGB1C2P0DMR2 95 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 CXCR1P25024 350 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 PSMB8P28062 276 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 SRIP30626 198 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 CASP2P42575 452 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 SSR4P51571 173 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 TSPEAR-AS2P59090 65 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 TPI1P60174 286 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 DRAM2Q6UX65 266 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 MBOAT1Q6ZNC8 495 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 ST6GALNAC3Q8NDV1 305 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 OR5B17Q8NGF7 314 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 OR4P4Q8NGL7 312 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 PSMA8Q8TAA3 256 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 SCGB1C1Q8TD33 95 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 C4orf3Q8WVX3 66 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 ZNF75CPQ92670 426 aaPredicted RBP-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 TEKT1Q969V4 418 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 REEP6Q96HR9 211 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 JSRP1Q96MG2 331 aaPredicted RBP-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 ATP6V0BQ99437 205 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 C1QTNF6Q9BXI9 259 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 MRPL13Q9BYD1 178 aaKnown RBP-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 TSGA10Q9BZW7 698 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 OR2AG1Q9H205 316 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 TAAR3PQ9P1P4 343 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 SNX12Q9UMY4 172 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 C14orf166Q9Y224 244 aaKnown RBP-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 POLR3AO14802 1390 aaPredicted RBP-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 PTPRFP10586 1907 aa-2.91□□□□□ -2.88
SNORA40.16-201ENST00000517238 MAST2Q6P0Q8 1798 aa-2.92□□□□□ -2.88
SNORA40.16-201ENST00000517238 MYH9P35579 1960 aaKnown RBP-2.92□□□□□ -2.88
SNORA40.16-201ENST00000517238 TRAV23DV6A0A075B6W5 121 aa-2.92□□□□□ -2.88
SNORA40.16-201ENST00000517238 CLDN5O00501 218 aa-2.92□□□□□ -2.88
SNORA40.16-201ENST00000517238 ACOX3O15254 700 aa-2.92□□□□□ -2.88
SNORA40.16-201ENST00000517238 RAD51CO43502 376 aa-2.92□□□□□ -2.88
SNORA40.16-201ENST00000517238 RAMP3O60896 148 aa-2.92□□□□□ -2.88
SNORA40.16-201ENST00000517238 RALBP11234 206 aa-2.92□□□□□ -2.88
SNORA40.16-201ENST00000517238 CCR1P32246 355 aa-2.92□□□□□ -2.88
SNORA40.16-201ENST00000517238 GABRA3P34903 492 aa-2.92□□□□□ -2.88
SNORA40.16-201ENST00000517238 PFN2P35080 140 aa-2.92□□□□□ -2.88
SNORA40.16-201ENST00000517238 MDH1P40925 334 aaKnown RBP-2.92□□□□□ -2.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms