RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 PCDH15Q96QU1 1955 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 ATRQ13535 2644 aa0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 BOD1L1Q8NFC6 3051 aa0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 SPTAN1Q13813 2472 aaKnown RBP0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 IGHV3OR15-7A0A075B7D8 119 aa0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 SPOPO43791 374 aa0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 CALRP27797 417 aaKnown RBP0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 VN1R4Q7Z5H5 301 aa0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 SUN5Q8TC36 379 aa0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 SPPL2BQ8TCT7 592 aa0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 BIRC8Q96P09 236 aa0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 POTEKPQ9BYX7 375 aa0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 RGCCQ9H4X1 137 aa0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 MTCH2Q9Y6C9 303 aa0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 GVINP1Q7Z2Y8 2422 aa0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 FLNAP21333 2647 aaKnown RBP0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 IGSF10Q6WRI0 2623 aa0.91□□□□□ -2.26
SCARNA1-201ENST00000517138 BIRC6Q9NR09 4857 aa0.9□□□□□ -2.26
SCARNA1-201ENST00000517138 MYH11P35749 1972 aa0.9□□□□□ -2.26
SCARNA1-201ENST00000517138 CC2D2AQ9P2K1 1620 aa0.9□□□□□ -2.26
SCARNA1-201ENST00000517138 WDR90Q96KV7 1748 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 REV3LO60673 3130 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 MYO5BQ9ULV0 1848 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 IGLV3-9A0A075B6K5 115 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 J3QLI3 93 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 SPAM1P38567 509 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 PEX19P40855 299 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 RWDD2BP57060 319 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 ZNF117Q03924 483 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 SPAG1Q07617 926 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 OR4X1Q8NH49 305 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 SPACA4Q8TDM5 124 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 TOP1MTQ969P6 601 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 TMBIM1Q969X1 311 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 RETNLBQ9BQ08 111 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 FBXO44Q9H4M3 255 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 SYNE2Q8WXH0 6885 aaKnown RBP0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 MYOFQ9NZM1 2061 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 SPEGQ15772 3267 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 RELNP78509 3460 aa0.9□□□□□ -2.27
SCARNA1-201ENST00000517138 ZFYVE26Q68DK2 2539 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 MACF1Q9UPN3 7388 aaKnown RBP0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 GOLGB1Q14789 3259 aaKnown RBP0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 TENM4Q6N022 2769 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 TRGV2A0A075B6R0 118 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 NCF1BA6NI72 391 aaPredicted RBP0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 NCF1CA8MVU1 366 aaPredicted RBP0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 PDCD6O75340 191 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 PRKACAP17612 351 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 ALOX5APP20292 161 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 PEBP1P30086 187 aaKnown RBP0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 RHOAP61586 193 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 DEFA6Q01524 100 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 AGR3Q8TD06 166 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 Q9BRP9 147 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 TAPBPLQ9BX59 468 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 VCX3AQ9NNX9 186 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 DIABLOQ9NR28 239 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 SDHAF2Q9NX18 166 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 CREBBPQ92793 2442 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 PCNX1Q96RV3 2341 aa0.89□□□□□ -2.27
SCARNA1-201ENST00000517138 EPPK1P58107 5090 aaKnown RBP0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 ADAMTSL1Q8N6G6 1762 aa0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 DENND4BO75064 1496 aaPredicted RBP0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 ERCC6Q03468 1493 aa0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 CEP290O15078 2479 aa0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 TMEM250H0YL14 139 aa0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 TOR1AO14656 332 aa0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 LTAP01374 205 aa0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 SLC2A1P11166 492 aa0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 OR4A15Q8NGL6 344 aa0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 CASTOR1Q8WTX7 329 aa0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 TMIGD2Q96BF3 282 aa0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 SPZ1Q9BXG8 430 aa0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 IFNKQ9P0W0 207 aa0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 TLN1Q9Y490 2541 aaKnown RBP0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 HYDINQ4G0P3 5121 aa0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 TTC41PQ6P2S7 1318 aa0.88□□□□□ -2.27
SCARNA1-201ENST00000517138 NEBP20929 6669 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 IQSEC2Q5JU85 1478 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 ARR3P36575 388 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 STX4Q12846 297 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 RESP18Q5W5W9 173 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 LINC00523Q86TU6 105 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 DOK4Q8TEW6 326 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 NELFBQ8WX92 580 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 APOL4Q9BPW4 351 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 SUCNR1Q9BXA5 334 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 MAP1LC3CQ9BXW4 147 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 FBXL15Q9H469 300 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 WASHC3Q9Y3C0 194 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 CNOT1A5YKK6 2376 aaKnown RBP0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 USP34Q70CQ2 3546 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 MUC3AQ02505 3323 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 KDM5CP41229 1560 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 USP42Q9H9J4 1324 aaKnown RBP0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 ACACBO00763 2458 aa0.87□□□□□ -2.27
SCARNA1-201ENST00000517138 AQRO60306 1485 aaKnown RBP eCLIP0.86□□□□□ -2.27
SCARNA1-201ENST00000517138 BCL9LQ86UU0 1499 aa0.86□□□□□ -2.27
SCARNA1-201ENST00000517138 EP300Q09472 2414 aaPredicted RBP0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms