RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 IER3IP1Q9Y5U9 82 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 ENPP4Q9Y6X5 453 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 DIDO1Q9BTC0 2240 aaKnown RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 ZNF407Q9C0G0 2248 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 PHF3Q92576 2039 aaKnown RBP2.98□□□□□ -1.93
HTT-210ENST00000512909 NOTCH3Q9UM47 2321 aa2.98□□□□□ -1.93
HTT-210ENST00000512909 IGHV3OR16-13A0A075B7E8 117 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 A0A087WUU8 490 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 ISPDA4D126 451 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 A6NIZ1 184 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 M0R233 179 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 TNFRSF11BO00300 401 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 TIMM8AO60220 97 aaPredicted RBP2.97□□□□□ -1.93
HTT-210ENST00000512909 NDUFB2O95178 105 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 MPZL1O95297 269 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 SERPINA5P05154 406 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 FABP3P05413 133 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 FREM3P0C091 2139 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 ASAH2BP0C7U1 165 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 PGA4P0DJD7 388 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 PGA3P0DJD8 388 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 NR2C1P13056 603 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 SLC25A16P16260 332 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 ZNF823P16415 610 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 ZNF32P17041 273 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 FUT3P21217 361 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 STOMP27105 288 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 GLRXP35754 106 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 GPR6P46095 362 aaPredicted RBP2.97□□□□□ -1.93
HTT-210ENST00000512909 ERFP50548 548 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 EFNB2P52799 333 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 APOC4P55056 127 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 TAS2R19P59542 299 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 RAP1BP61224 184 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 PCBD1P61457 104 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 RAP1AP62834 184 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 CCL8P80075 99 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 FMODQ06828 376 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 HERPUD1Q15011 391 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 CHRFAM7AQ494W8 412 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 C2orf83Q53S99 150 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 SMARCD3Q6STE5 483 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 PGAP1Q75T13 922 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 DHFR2Q86XF0 187 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 WDFY1Q8IWB7 410 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 CLDN22Q8N7P3 220 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 ARIH2OSQ8N7S6 290 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 BHLHE23Q8NDY6 225 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 NOXO1Q8NFA2 376 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 OR52E2Q8NGJ4 325 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 OR4K13Q8NH42 304 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 GNPDA2Q8TDQ7 276 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 CCL17Q92583 94 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 CMBLQ96DG6 245 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 TIMD4Q96H15 378 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 Q96M85 177 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 TECTBQ96PL2 329 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 DOK1Q99704 481 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 THTPAQ9BU02 230 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 MRPL37Q9BZE1 423 aaKnown RBP2.97□□□□□ -1.93
HTT-210ENST00000512909 OR51J1Q9H342 316 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 SIAEQ9HAT2 523 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 NOX3Q9HBY0 568 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 RAB18Q9NP72 206 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 ASH1LQ9NR48 2969 aaKnown RBP2.97□□□□□ -1.93
HTT-210ENST00000512909 TMEM38BQ9NVV0 291 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 UBAP1Q9NZ09 502 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 FBXL3Q9UKT7 428 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 GMEB1Q9Y692 573 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 NCOA6Q14686 2063 aaPredicted RBP2.97□□□□□ -1.93
HTT-210ENST00000512909 RP1L1Q8IWN7 2480 aaPredicted RBP2.97□□□□□ -1.93
HTT-210ENST00000512909 FLNCQ14315 2725 aa2.97□□□□□ -1.93
HTT-210ENST00000512909 USP9YO00507 2555 aaPredicted RBP2.97□□□□□ -1.93
HTT-210ENST00000512909 POLEQ07864 2286 aa2.96□□□□□ -1.93
HTT-210ENST00000512909 IGKV1D-43A0A0B4J1Z2 117 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 IGHV3-64DA0A0J9YX35 117 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 F5H5K5 113 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 H3BN98 237 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 H7C417 338 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 FXYD1O00168 92 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 DYNC1I1O14576 645 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 CDC42EP2O14613 210 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 FFAR1O14842 300 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 GYG2O15488 501 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 SGCEO43556 437 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 CD5LO43866 347 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 CCNB2O95067 398 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 OPN1MWP04001 364 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 CD14P08571 375 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 CSF3P09919 207 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 OPN1MW2P0DN77 364 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 OPN1MW3P0DN78 364 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 ZNF35P13682 527 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 ZNF14P17017 642 aaPredicted RBP2.96□□□□□ -1.94
HTT-210ENST00000512909 MSR1P21757 451 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 KLF3P57682 345 aaPredicted RBP2.96□□□□□ -1.94
HTT-210ENST00000512909 ERVS71-1P61550 626 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 PPP1CBP62140 327 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 PSG4Q00888 419 aa2.96□□□□□ -1.94
HTT-210ENST00000512909 IL24Q13007 206 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms