RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 KIAA2026Q5HYC2 2103 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 A0A075B6Q4 140 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 TRAV8-7A0A075B6U6 113 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 LOC100506127A0A0U1RQW1 187 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 TRDV1A0A1B0GX56 115 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 SERPINE3A8MV23 424 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 MMP23AO75900 390 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 NRASP01111 189 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 RBP4P02753 201 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 PSMA1P25786 263 aaKnown RBP7.08□□□□□ -1.28
NUP54-211ENST00000512151 SOX6P35712 828 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 CDX1P47902 265 aaPredicted RBP7.08□□□□□ -1.28
NUP54-211ENST00000512151 PPP5CP53041 499 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 RGS21Q2M5E4 152 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 ACP7Q6ZNF0 438 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 STPG2Q8N412 459 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 COMMD1Q8N668 190 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 DRAM1Q8N682 238 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 MINDY2Q8NBR6 621 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 OR51A2Q8NGJ7 313 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 TMEM106AQ96A25 262 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 ZNF488Q96MN9 340 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 FAM110AQ9BQ89 295 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 TXNL4BQ9NX01 149 aaKnown RBP7.08□□□□□ -1.28
NUP54-211ENST00000512151 TAS2R4Q9NYW5 299 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 MOB4Q9Y3A3 225 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 MPC1Q9Y5U8 109 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 PEX16Q9Y5Y5 336 aa7.08□□□□□ -1.28
NUP54-211ENST00000512151 IGKV1-27A0A075B6S5 117 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 TMEM210A6NLX4 147 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 A8MZ25 164 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 M0QZK8 103 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 GATBO75879 557 aaKnown RBP7.07□□□□□ -1.28
NUP54-211ENST00000512151 IFNA6P05013 189 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 UCHL1P09936 223 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 ZNF20P17024 532 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 ATF1P18846 271 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 HTR1DP28221 377 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 PRDX2P32119 198 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 BRS3P32247 399 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 ETV6P41212 452 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 ZNF45Q02386 682 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 TRAM1Q15629 374 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 CLVS2Q5SYC1 327 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 ZNF429Q86V71 674 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 SERPINA12Q8IW75 414 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 ZDHHC23Q8IYP9 409 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 CENPSQ8N2Z9 138 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 ZNF561Q8N587 486 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 C5orf56Q8N8D9 126 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 OR11H1Q8NG94 326 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 OR13C9Q8NGT0 318 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 TRMT10AQ8TBZ6 339 aaKnown RBP7.07□□□□□ -1.28
NUP54-211ENST00000512151 C4orf3Q8WVX3 66 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 ITFG2Q969R8 447 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 C10orf35Q96D05 121 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 RNF170Q96K19 258 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 GFI1Q99684 422 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 CHST5Q9GZS9 411 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 OR51I2Q9H344 312 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 ZCCHC4Q9H5U6 513 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 PLEKHA1Q9HB21 404 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 ETAA1Q9NY74 926 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 SSR3Q9UNL2 185 aa7.07□□□□□ -1.28
NUP54-211ENST00000512151 PKHD1P08F94 4074 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 ANXA2P2A6NMY6 339 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 SERPINA3P01011 423 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 IL1AP01583 271 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 TK1P04183 234 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 FSTP19883 344 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 FGF9P31371 208 aaPredicted RBP7.06□□□□□ -1.28
NUP54-211ENST00000512151 S100A5P33763 92 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 POU3F4P49335 361 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 GPM6AP51674 278 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 SLC35B1P78383 322 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 OXA1LQ15070 435 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 CEACAM21Q3KPI0 293 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 PLCXD3Q63HM9 321 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 C22orf42Q6IC83 251 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 FAM53AQ6NSI3 398 aaPredicted RBP7.06□□□□□ -1.28
NUP54-211ENST00000512151 TEX38Q6PEX7 206 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 UTS2BQ765I0 119 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 LRRTM1Q86UE6 522 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 HAPLN4Q86UW8 402 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 LYPD6Q86Y78 171 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 BATF2Q8N1L9 274 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 FAM71E2Q8N5Q1 922 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 RNF152Q8N8N0 203 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 OR5A2Q8NGI9 324 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 PP6455Q8WZ26 134 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 DCUN1D4Q92564 292 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 SPACA5Q96QH8 159 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 CLEC7AQ9BXN2 247 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 KRTAP4-7Q9BYR0 210 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 DPM3Q9P2X0 92 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 SESN1Q9Y6P5 492 aa7.06□□□□□ -1.28
NUP54-211ENST00000512151 FAT2Q9NYQ8 4349 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 DNAH6Q9C0G6 4158 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 FAM230AA0A1W2PPH8 454 aa7.05□□□□□ -1.28
NUP54-211ENST00000512151 PQLC2LA1A4F0 135 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms