RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 USH1CQ9Y6N9 552 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 MINOS1-NBL1R4GNA1 71 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 TNIKQ9UKE5 1360 aa0.78□□□□□ -2.28
SMC4-227ENST00000497984 OTOFQ9HC10 1997 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 MUC21A0A0G2JKD1 596 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 MUC21A0A140T8X8 626 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 VPS37CA5D8V6 355 aaPredicted RBP0.77□□□□□ -2.29
SMC4-227ENST00000497984 FNDC10F2Z333 226 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 RNASEK-C17orf49H0YIS7 233 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 UBDO15205 165 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 POLR3GO15318 223 aaPredicted RBP0.77□□□□□ -2.29
SMC4-227ENST00000497984 DENRO43583 198 aaKnown RBP0.77□□□□□ -2.29
SMC4-227ENST00000497984 TRAPPC3O43617 180 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 RPA3P35244 121 aaPredicted RBP0.77□□□□□ -2.29
SMC4-227ENST00000497984 HSPA13P48723 471 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 CARD18P57730 90 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 KRTAP10-4P60372 401 aaPredicted RBP0.77□□□□□ -2.29
SMC4-227ENST00000497984 DEFA6Q01524 100 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 CD164Q04900 197 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 FAM162BQ5T6X4 162 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 OR9I1Q8NGQ6 314 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 OR2Y1Q8NGV0 311 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 GTF2H4Q92759 462 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 PGLYRP3Q96LB9 341 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 GLT1D1Q96MS3 346 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 FAAP24Q9BTP7 215 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 C16orf95Q9H693 158 aa0.77□□□□□ -2.29
SMC4-227ENST00000497984 H0YC42 278 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 TOR1AO14656 332 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 CCNOP22674 350 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 GABRA3P34903 492 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 OR2B6P58173 313 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 UBE2KP61086 200 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 TSPAN5P62079 268 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 VSNL1P62760 191 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 BSPH1Q075Z2 132 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 C18orf21Q32NC0 220 aaPredicted RBP0.76□□□□□ -2.29
SMC4-227ENST00000497984 EBLN2Q6P2I7 272 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 ZNRF2Q8NHG8 242 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 BCL2L14Q9BZR8 327 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 RAB1BQ9H0U4 201 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 OR51E2Q9H255 320 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 MAT2BQ9NZL9 334 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 WASHC3Q9Y3C0 194 aa0.76□□□□□ -2.29
SMC4-227ENST00000497984 IGKV1D-43A0A0B4J1Z2 117 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 A0A0G2JQZ4 141 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 A0A1B0GW15 77 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 SOD1P00441 154 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 GPX1P07203 203 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 SPAM1P38567 509 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 OR10A3P58181 314 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 C1QTNF8P60827 252 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 DYNLL1P63167 89 aaKnown RBP0.75□□□□□ -2.29
SMC4-227ENST00000497984 ZNF117Q03924 483 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 PDGFRLQ15198 375 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 SSX6Q7RTT6 188 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 VN1R4Q7Z5H5 301 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 PDCL2Q8N4E4 241 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 ERMNQ8TAM6 284 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 FAM45AQ8TCE6 357 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 CATSPER2Q96P56 530 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 OR52B2Q96RD2 323 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 UPK3BQ9BT76 320 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 C11orf49Q9H6J7 331 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 SNX24Q9Y343 169 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 MPDZO75970 2070 aa0.75□□□□□ -2.29
SMC4-227ENST00000497984 MYO15BQ96JP2 1530 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 LCTP09848 1927 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 RAB3GAP2Q9H2M9 1393 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 PTPRJQ12913 1337 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 RAB19A4D1S5 217 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 K7EQS6 105 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 PSMD11O00231 422 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 NAPSAO96009 420 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 OR4A8P0C604 315 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 SKP2Q13309 424 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 TPRXLQ17RH7 258 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 LGALS9CQ6DKI2 356 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 AHSA2Q719I0 299 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 SELENOHQ8IZQ5 122 aaKnown RBP0.74□□□□□ -2.29
SMC4-227ENST00000497984 TRIML2Q8N7C3 387 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 YIPF7Q8N8F6 280 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 ACBD4Q8NC06 268 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 OR5D18Q8NGL1 313 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 OR11L1Q8NGX0 322 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 OR4X1Q8NH49 305 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 ANGPTL6Q8NI99 470 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 DTD1Q8TEA8 209 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 NAP1L5Q96NT1 182 aaPredicted RBP0.74□□□□□ -2.29
SMC4-227ENST00000497984 Q9BRP9 147 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 C1QTNF6Q9BXI9 259 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 SMDT1Q9H4I9 107 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 HAUS4Q9H6D7 363 aa0.74□□□□□ -2.29
SMC4-227ENST00000497984 METTL17Q9H7H0 456 aaPredicted RBP0.74□□□□□ -2.29
SMC4-227ENST00000497984 MDC1Q14676 2089 aaKnown RBP0.74□□□□□ -2.29
SMC4-227ENST00000497984 PXDNLA1KZ92 1463 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 PLCH2O75038 1416 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 IGLV3-9A0A075B6K5 115 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 B4DEV8 164 aa0.73□□□□□ -2.29
SMC4-227ENST00000497984 FABP7O15540 132 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms