RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ELANEP08246 267 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 UBBP0CG47 229 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 CAPGP40121 348 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 RANBP1P43487 201 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 ZNF137PP52743 207 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 EGFEM1PQ0D2K5 195 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 DOC2BQ14184 412 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 PNLIPRP3Q17RR3 467 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 CXorf66Q5JRM2 361 aaPredicted RBP6.93□□□□□ -1.3
NUP50-217ENST00000491860 VAX1Q5SQQ9 334 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 OR2G6Q5TZ20 316 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 AWAT2Q6E213 333 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 OR2W3Q7Z3T1 314 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 STPG2Q8N412 459 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 JAGN1Q8N5M9 183 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 LINC00482Q8N8I6 264 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 CYGBQ8WWM9 190 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 LEAP2Q969E1 77 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 RASL11BQ9BPW5 248 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 UQCC2Q9BRT2 126 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 CST11Q9H112 138 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 ABCG5Q9H222 651 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 VCXQ9H320 206 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 ETAA1Q9NY74 926 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 KCNIP1Q9NZI2 227 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 RCC2Q9P258 522 aaKnown RBP6.93□□□□□ -1.3
NUP50-217ENST00000491860 GNG12Q9UBI6 72 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 MRPS28Q9Y2Q9 187 aaKnown RBP6.93□□□□□ -1.3
NUP50-217ENST00000491860 ERICH4A6NGS2 130 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 MYL12BO14950 172 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 RAMP3O60896 148 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 SC5DO75845 299 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 RGS11O94810 467 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 MPIG6BO95866 241 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 FUT3P21217 361 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 THBS3P49746 956 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 WNT4P56705 351 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 ST3GAL4Q11206 333 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 HNF4GQ14541 408 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 SMN1Q16637 294 aaKnown RBP6.92□□□□□ -1.3
NUP50-217ENST00000491860 LY6G6FQ5SQ64 297 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 SYT6Q5T7P8 510 aaPredicted RBP6.92□□□□□ -1.3
NUP50-217ENST00000491860 XAF1Q6GPH4 301 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 RAB12Q6IQ22 244 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 GLIPR1L1Q6UWM5 242 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 SLC25A48Q6ZT89 311 aaKnown RBP6.92□□□□□ -1.3
NUP50-217ENST00000491860 ZNF329Q86UD4 541 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 ZNF695Q8IW36 515 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 MRPL41Q8IXM3 137 aaKnown RBP6.92□□□□□ -1.3
NUP50-217ENST00000491860 C8orf59Q8N0T1 100 aaPredicted RBP6.92□□□□□ -1.3
NUP50-217ENST00000491860 GAPTQ8N292 157 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 MS4A15Q8N5U1 240 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 KLHL30-AS1Q8NEE0 82 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 OR8U1Q8NH10 309 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 RTN4IP1Q8WWV3 396 aaPredicted RBP6.92□□□□□ -1.3
NUP50-217ENST00000491860 EAF1Q96JC9 268 aaPredicted RBP6.92□□□□□ -1.3
NUP50-217ENST00000491860 PGLYRP3Q96LB9 341 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 ERGIC3Q9Y282 383 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 TENM3Q9P273 2699 aa6.92□□□□□ -1.3
NUP50-217ENST00000491860 TRBV5-7A0A0A0MS05 114 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 SH2D7A6NKC9 451 aaPredicted RBP6.91□□□□□ -1.3
NUP50-217ENST00000491860 LANCL1O43813 399 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 CRTAPO75718 401 aaPredicted RBP6.91□□□□□ -1.3
NUP50-217ENST00000491860 IGHV3-7P01780 117 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 MGMTP16455 207 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 VDAC1P21796 283 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 SOX6P35712 828 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 GPR12P47775 334 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 CDX1P47902 265 aaPredicted RBP6.91□□□□□ -1.3
NUP50-217ENST00000491860 RPS11P62280 158 aaKnown RBP eCLIP6.91□□□□□ -1.3
NUP50-217ENST00000491860 FOXE3Q13461 319 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 GPR50Q13585 617 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 Q8N6K4 173 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 RNF152Q8N8N0 203 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 TMEM104Q8NE00 496 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 CCDC107Q8WV48 283 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 MUL1Q969V5 352 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 ST6GALNAC6Q969X2 333 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 DERL3Q96Q80 235 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 S1PR3Q99500 378 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 SELENOIQ9C0D9 397 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 GHITMQ9H3K2 345 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 PLCXD1Q9NUJ7 323 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 JPT1Q9UK76 154 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 PEX16Q9Y5Y5 336 aa6.91□□□□□ -1.3
NUP50-217ENST00000491860 TRAV39A0A0B4J263 110 aa6.9□□□□□ -1.3
NUP50-217ENST00000491860 A0A1W2PPE3 182 aa6.9□□□□□ -1.3
NUP50-217ENST00000491860 C12orf77C9JDV5 145 aa6.9□□□□□ -1.3
NUP50-217ENST00000491860 H0YHG0 523 aa6.9□□□□□ -1.3
NUP50-217ENST00000491860 PDCD6O75340 191 aa6.9□□□□□ -1.3
NUP50-217ENST00000491860 HBZP02008 142 aa6.9□□□□□ -1.3
NUP50-217ENST00000491860 MAS1P04201 325 aa6.9□□□□□ -1.3
NUP50-217ENST00000491860 IGF1P05019 195 aa6.9□□□□□ -1.3
NUP50-217ENST00000491860 CELP19835 753 aa6.9□□□□□ -1.3
NUP50-217ENST00000491860 REG1BP48304 166 aa6.9□□□□□ -1.3
NUP50-217ENST00000491860 ADARB1P78563 741 aaKnown RBP6.9□□□□□ -1.3
NUP50-217ENST00000491860 HTD2P86397 168 aa6.9□□□□□ -1.3
NUP50-217ENST00000491860 DIAPH2-AS1Q14236 149 aa6.9□□□□□ -1.3
NUP50-217ENST00000491860 KIR2DS1Q14954 304 aa6.9□□□□□ -1.3
NUP50-217ENST00000491860 DEFB121Q5J5C9 76 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms