RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 C10orf67Q8IYJ2 551 aa12.29□□□□□ -0.44
NUP58-213ENST00000490231 OR5M8Q8NGP6 311 aa12.29□□□□□ -0.44
NUP58-213ENST00000490231 CCDC107Q8WV48 283 aa12.29□□□□□ -0.44
NUP58-213ENST00000490231 TFAP2CQ92754 450 aa12.29□□□□□ -0.44
NUP58-213ENST00000490231 SLC29A1Q99808 456 aa12.29□□□□□ -0.44
NUP58-213ENST00000490231 RASL11BQ9BPW5 248 aa12.29□□□□□ -0.44
NUP58-213ENST00000490231 SPACA1Q9HBV2 294 aa12.29□□□□□ -0.44
NUP58-213ENST00000490231 ZNF580Q9UK33 172 aa12.29□□□□□ -0.44
NUP58-213ENST00000490231 IGHV3-43A0A0B4J1X8 118 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 AIPO00170 330 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 OGG1O15527 345 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 GPX5O75715 221 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 IGHG4P01861 327 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 IGHV3-43DP0DP04 118 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 IGFBP3P17936 291 aaPredicted RBP12.28□□□□□ -0.44
NUP58-213ENST00000490231 ETV1P50549 477 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 RAB25P57735 213 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 RIPK1Q13546 671 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 GPR176Q14439 515 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 C9orf66Q5T8R8 295 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 SLC25A48Q6ZT89 311 aaKnown RBP12.28□□□□□ -0.44
NUP58-213ENST00000490231 STX19Q8N4C7 294 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 FAM71E2Q8N5Q1 922 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 ZNF439Q8NDP4 499 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 UBALD1Q8TB05 177 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 NEK7Q8TDX7 302 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 SMIM19Q96E16 107 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 ZNF184Q99676 751 aaPredicted RBP12.28□□□□□ -0.44
NUP58-213ENST00000490231 RAB9BQ9NP90 201 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 BABAM2Q9NXR7 383 aa12.28□□□□□ -0.44
NUP58-213ENST00000490231 RCC2Q9P258 522 aaKnown RBP12.28□□□□□ -0.44
NUP58-213ENST00000490231 LSM4Q9Y4Z0 139 aaKnown RBP12.28□□□□□ -0.44
NUP58-213ENST00000490231 SIRT4Q9Y6E7 314 aaPredicted RBP12.28□□□□□ -0.44
NUP58-213ENST00000490231 TENM3Q9P273 2699 aa12.27□□□□□ -0.44
NUP58-213ENST00000490231 TRBV5-5A0A0J9YX44 114 aa12.27□□□□□ -0.45
NUP58-213ENST00000490231 A0A1W2PP11 408 aa12.27□□□□□ -0.45
NUP58-213ENST00000490231 ZNF736B4DX44 427 aaPredicted RBP12.27□□□□□ -0.45
NUP58-213ENST00000490231 C12orf77C9JDV5 145 aa12.27□□□□□ -0.45
NUP58-213ENST00000490231 SPINT2O43291 252 aa12.27□□□□□ -0.45
NUP58-213ENST00000490231 WBP4O75554 376 aaKnown RBP12.27□□□□□ -0.45
NUP58-213ENST00000490231 IGF1P05019 195 aa12.27□□□□□ -0.45
NUP58-213ENST00000490231 VDAC1P21796 283 aa12.27□□□□□ -0.45
NUP58-213ENST00000490231 SOX6P35712 828 aa12.27□□□□□ -0.45
NUP58-213ENST00000490231 LUMP51884 338 aaPredicted RBP12.27□□□□□ -0.45
NUP58-213ENST00000490231 SMN1Q16637 294 aaKnown RBP12.27□□□□□ -0.45
NUP58-213ENST00000490231 DEFB136Q30KP8 78 aa12.27□□□□□ -0.45
NUP58-213ENST00000490231 SLC22A6Q4U2R8 563 aa12.27□□□□□ -0.45
NUP58-213ENST00000490231 OR2G6Q5TZ20 316 aa12.27□□□□□ -0.45
NUP58-213ENST00000490231 STEAP3Q658P3 488 aa12.27□□□□□ -0.45
NUP58-213ENST00000490231 FAM53AQ6NSI3 398 aaPredicted RBP12.27□□□□□ -0.45
NUP58-213ENST00000490231 LCNL1Q6ZST4 164 aa12.27□□□□□ -0.45
NUP58-213ENST00000490231 GAPTQ8N292 157 aa12.27□□□□□ -0.45
NUP58-213ENST00000490231 ORAI1Q96D31 301 aa12.27□□□□□ -0.45
NUP58-213ENST00000490231 MRPS24Q96EL2 167 aaKnown RBP12.27□□□□□ -0.45
NUP58-213ENST00000490231 HSPB9Q9BQS6 159 aa12.27□□□□□ -0.45
NUP58-213ENST00000490231 RYR3Q15413 4870 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 IRGMA1A4Y4 181 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 MCRIP1C9JLW8 97 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 SLC31A2O15432 143 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 OR5H8P0DN80 308 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 VHLP40337 213 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 ZNF134P52741 427 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 F2RL1P55085 397 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 FHL3Q13643 280 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 CT45A1Q5HYN5 189 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 C6orf183Q5T699 404 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 SYT6Q5T7P8 510 aaPredicted RBP12.26□□□□□ -0.45
NUP58-213ENST00000490231 TRAT1Q6PIZ9 186 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 CT45A3Q8NHU0 189 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 C4orf3Q8WVX3 66 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 CHCHD6Q9BRQ6 235 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 ETAA1Q9NY74 926 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 GNG12Q9UBI6 72 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 CKLFQ9UBR5 152 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 TRAPPC2LQ9UL33 140 aa12.26□□□□□ -0.45
NUP58-213ENST00000490231 CA11O75493 328 aa12.25□□□□□ -0.45
NUP58-213ENST00000490231 LALBAP00709 142 aa12.25□□□□□ -0.45
NUP58-213ENST00000490231 FSTP19883 344 aa12.25□□□□□ -0.45
NUP58-213ENST00000490231 PSMB8P28062 276 aa12.25□□□□□ -0.45
NUP58-213ENST00000490231 Q499Y3 187 aa12.25□□□□□ -0.45
NUP58-213ENST00000490231 YIF1BQ5BJH7 314 aa12.25□□□□□ -0.45
NUP58-213ENST00000490231 ZNF555Q8NEP9 628 aa12.25□□□□□ -0.45
NUP58-213ENST00000490231 OR13C5Q8NGS8 318 aa12.25□□□□□ -0.45
NUP58-213ENST00000490231 GHSRQ92847 366 aa12.25□□□□□ -0.45
NUP58-213ENST00000490231 KCTD7Q96MP8 289 aa12.25□□□□□ -0.45
NUP58-213ENST00000490231 RDH12Q96NR8 316 aa12.25□□□□□ -0.45
NUP58-213ENST00000490231 DIMT1Q9UNQ2 313 aaKnown RBP12.25□□□□□ -0.45
NUP58-213ENST00000490231 EXOSC1Q9Y3B2 195 aaKnown RBP12.25□□□□□ -0.45
NUP58-213ENST00000490231 MAGEA13PA6NCF6 341 aa12.24□□□□□ -0.45
NUP58-213ENST00000490231 FAM90A10PA6NDY2 464 aa12.24□□□□□ -0.45
NUP58-213ENST00000490231 FAM90A7PA6NKC0 464 aa12.24□□□□□ -0.45
NUP58-213ENST00000490231 FAM90A23PA8MXZ1 464 aa12.24□□□□□ -0.45
NUP58-213ENST00000490231 SEC14L6B5MCN3 397 aa12.24□□□□□ -0.45
NUP58-213ENST00000490231 LANCL1O43813 399 aa12.24□□□□□ -0.45
NUP58-213ENST00000490231 SC5DO75845 299 aa12.24□□□□□ -0.45
NUP58-213ENST00000490231 HBZP02008 142 aa12.24□□□□□ -0.45
NUP58-213ENST00000490231 MYL12AP19105 171 aa12.24□□□□□ -0.45
NUP58-213ENST00000490231 RPS11P62280 158 aaKnown RBP eCLIP12.24□□□□□ -0.45
NUP58-213ENST00000490231 DMKNQ6E0U4 476 aaPredicted RBP12.24□□□□□ -0.45
NUP58-213ENST00000490231 RAB12Q6IQ22 244 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms