RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 C3orf56Q8N813 242 aa12.18□□□□□ -0.46
CXCL12-207ENST00000488591 OR4F5Q8NH21 305 aa12.18□□□□□ -0.46
CXCL12-207ENST00000488591 MRPL30Q8TCC3 161 aaKnown RBP12.18□□□□□ -0.46
CXCL12-207ENST00000488591 RIMS4Q9H426 269 aaPredicted RBP12.18□□□□□ -0.46
CXCL12-207ENST00000488591 RAB18Q9NP72 206 aa12.18□□□□□ -0.46
CXCL12-207ENST00000488591 HSF4Q9ULV5 492 aa12.18□□□□□ -0.46
CXCL12-207ENST00000488591 A0A0A6YYD4 124 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 SMIM30A4D0T7 59 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 METTL21EPA6NDL7 271 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 C12orf77C9JDV5 145 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 F2RL2O00254 374 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 LDLRAD4O15165 306 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 JUNBP17275 347 aaPredicted RBP12.17□□□□□ -0.46
CXCL12-207ENST00000488591 RCC1P18754 421 aaPredicted RBP12.17□□□□□ -0.46
CXCL12-207ENST00000488591 RAB6AP20340 208 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 BRS3P32247 399 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 SDC2P34741 201 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 GNG10P50151 68 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 DYNLT3P51808 116 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 LY6EQ16553 131 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 AWAT1Q58HT5 328 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 LDLRAD2Q5SZI1 272 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 CCDC144NLQ6NUI1 221 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 LIAT1Q6ZQX7 453 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 PRR18Q8N4B5 295 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 LEAP2Q969E1 77 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 PTX4Q96A99 478 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 MMP28Q9H239 520 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 BEX1Q9HBH7 125 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 TAF9BQ9HBM6 251 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 MBNL3Q9NUK0 354 aaKnown RBP12.17□□□□□ -0.46
CXCL12-207ENST00000488591 C1RLQ9NZP8 487 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 PITPNC1Q9UKF7 332 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 PSG11Q9UQ72 335 aa12.17□□□□□ -0.46
CXCL12-207ENST00000488591 A0A1B0GUS0 222 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 TRIM64CA6NLI5 447 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 OOSP1A8MZH6 123 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 AIREO43918 545 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 NDUFA7O95182 113 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 IGHV3-7P01780 117 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 HBZP02008 142 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 SLC2A2P11168 524 aaPredicted RBP12.16□□□□□ -0.46
CXCL12-207ENST00000488591 MNDAP41218 407 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 RAG2P55895 527 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 MRPS15P82914 257 aaKnown RBP12.16□□□□□ -0.46
CXCL12-207ENST00000488591 MXD1Q05195 221 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 TPTE2P1Q5T6R2 138 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 NR2C2APQ86WQ0 139 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 OR10X1Q8NGY0 326 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 UBALD1Q8TB05 177 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 RPEQ96AT9 228 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 YIPF6Q96EC8 236 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 CENPOQ9BU64 300 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 GFOD1Q9NXC2 390 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 ABRACLQ9P1F3 81 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 GNG12Q9UBI6 72 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 DAPK2Q9UIK4 370 aa12.16□□□□□ -0.46
CXCL12-207ENST00000488591 STAB1Q9NY15 2570 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 POM121CA8CG34 1229 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 RAB13P51153 203 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 MADCAM1Q13477 382 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 Q3ZCU0 254 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 UTF1Q5T230 341 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 SFXN4Q6P4A7 337 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 MOB1BQ7L9L4 216 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 C8orf31Q8N9H6 132 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 DTX3Q8N9I9 347 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 OR1L1Q8NH94 360 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 SETD6Q8TBK2 473 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 PIFOQ8TCI5 191 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 TOMM40LQ969M1 308 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 GALMQ96C23 342 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 RAB3CQ96E17 227 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 ARHGAP5-AS1Q96IT6 56 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 PECRQ9BY49 303 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 RNF167Q9H6Y7 350 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 OR2S2Q9NQN1 319 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 AK3Q9UIJ7 227 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 MGAT4AQ9UM21 535 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 TCF19Q9Y242 345 aa12.15□□□□□ -0.46
CXCL12-207ENST00000488591 IGHV3-43A0A0B4J1X8 118 aa12.14□□□□□ -0.47
CXCL12-207ENST00000488591 A0A0B4J203 849 aa12.14□□□□□ -0.47
CXCL12-207ENST00000488591 FOXI3A8MTJ6 420 aaPredicted RBP12.14□□□□□ -0.47
CXCL12-207ENST00000488591 LY6LH3BQJ8 138 aa12.14□□□□□ -0.47
CXCL12-207ENST00000488591 NAPSAO96009 420 aa12.14□□□□□ -0.47
CXCL12-207ENST00000488591 IGHV3-43DP0DP04 118 aa12.14□□□□□ -0.47
CXCL12-207ENST00000488591 IL3RAP26951 378 aa12.14□□□□□ -0.47
CXCL12-207ENST00000488591 EFNB2P52799 333 aa12.14□□□□□ -0.47
CXCL12-207ENST00000488591 TMEM50BP56557 158 aa12.14□□□□□ -0.47
CXCL12-207ENST00000488591 LOXL3P58215 753 aa12.14□□□□□ -0.47
CXCL12-207ENST00000488591 ARL6IP1Q15041 203 aa12.14□□□□□ -0.47
CXCL12-207ENST00000488591 CROCCP3Q8IVE0 287 aa12.14□□□□□ -0.47
CXCL12-207ENST00000488591 OR10R2Q8NGX6 335 aa12.14□□□□□ -0.47
CXCL12-207ENST00000488591 TAF15Q92804 592 aaKnown RBP eCLIP12.14□□□□□ -0.47
CXCL12-207ENST00000488591 CMSS1Q9BQ75 279 aaKnown RBP12.14□□□□□ -0.47
CXCL12-207ENST00000488591 ATG5Q9H1Y0 275 aa12.14□□□□□ -0.47
CXCL12-207ENST00000488591 C12orf4Q9NQ89 552 aa12.14□□□□□ -0.47
CXCL12-207ENST00000488591 MMP24Q9Y5R2 645 aa12.14□□□□□ -0.47
CXCL12-207ENST00000488591 TRBV6-6A0A0A6YYG2 114 aa12.13□□□□□ -0.47
CXCL12-207ENST00000488591 A0A1W2PPE3 182 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms