RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 DNMT1P26358 1616 aaKnown RBP3.03□□□□□ -1.92
CUL3-211ENST00000487558 NID2Q14112 1375 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 ZBED9Q6R2W3 1325 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 A6NED7 52 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 IGHMP01871 453 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 GADD45AP24522 165 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 EVI2BP34910 448 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 FOXA1P55317 472 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 DEFB134Q4QY38 66 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 CENPWQ5EE01 88 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 HENMT1Q5T8I9 393 aaKnown RBP3.02□□□□□ -1.93
CUL3-211ENST00000487558 VN1R4Q7Z5H5 301 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 NIT1Q86X76 327 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 PLCZ1Q86YW0 608 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 ZBTB8OSQ8IWT0 167 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 OR9I1Q8NGQ6 314 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 OR5K1Q8NHB7 308 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 B9D2Q9BPU9 175 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 KCNIP2Q9NS61 270 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 IMP3Q9NV31 184 aaKnown RBP3.02□□□□□ -1.93
CUL3-211ENST00000487558 R4GN34 69 aa3.02□□□□□ -1.93
CUL3-211ENST00000487558 THADAQ6YHU6 1953 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 GPR179Q6PRD1 2367 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 TRBV24-1A0A075B6N3 115 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 M0QYV0 167 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 CCRL2O00421 344 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 LTAP01374 205 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 PSKH1P11801 424 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 CTSEP14091 401 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 BAMBIQ13145 260 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 DNAL1Q4LDG9 190 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 CYHR1Q6ZMK1 362 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 LINC00304Q8N9R0 145 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 CMTM2Q8TAZ6 248 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 TMEM208Q9BTX3 173 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 TSSK6Q9BXA6 273 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 POTEKPQ9BYX7 375 aa3.01□□□□□ -1.93
CUL3-211ENST00000487558 ALX4Q9H161 411 aaPredicted RBP3.01□□□□□ -1.93
CUL3-211ENST00000487558 SPANXB1Q9NS25 103 aaPredicted RBP3.01□□□□□ -1.93
CUL3-211ENST00000487558 IGHV3OR15-7A0A075B7D8 119 aa3□□□□□ -1.93
CUL3-211ENST00000487558 A0A0A6YYH2 397 aa3□□□□□ -1.93
CUL3-211ENST00000487558 A6NJ64 397 aa3□□□□□ -1.93
CUL3-211ENST00000487558 B4DEV8 164 aa3□□□□□ -1.93
CUL3-211ENST00000487558 F5H5T6 163 aa3□□□□□ -1.93
CUL3-211ENST00000487558 SYNGR2O43760 224 aa3□□□□□ -1.93
CUL3-211ENST00000487558 ASS1P00966 412 aaKnown RBP3□□□□□ -1.93
CUL3-211ENST00000487558 IGLV6-57P01721 117 aa3□□□□□ -1.93
CUL3-211ENST00000487558 FBP1P09467 338 aa3□□□□□ -1.93
CUL3-211ENST00000487558 HRES1P13985 223 aa3□□□□□ -1.93
CUL3-211ENST00000487558 HIST1H1CP16403 213 aaKnown RBP3□□□□□ -1.93
CUL3-211ENST00000487558 CFL1P23528 166 aaKnown RBP3□□□□□ -1.93
CUL3-211ENST00000487558 PSMA1P25786 263 aaKnown RBP3□□□□□ -1.93
CUL3-211ENST00000487558 SULT1A2P50226 295 aa3□□□□□ -1.93
CUL3-211ENST00000487558 GABARAPL2P60520 117 aa3□□□□□ -1.93
CUL3-211ENST00000487558 IHHQ14623 411 aa3□□□□□ -1.93
CUL3-211ENST00000487558 ZNF141Q15928 474 aa3□□□□□ -1.93
CUL3-211ENST00000487558 EIF4E3Q8N5X7 224 aaKnown RBP3□□□□□ -1.93
CUL3-211ENST00000487558 DDI1Q8WTU0 396 aa3□□□□□ -1.93
CUL3-211ENST00000487558 TVP23CQ96ET8 276 aa3□□□□□ -1.93
CUL3-211ENST00000487558 C8orf76Q96K31 380 aa3□□□□□ -1.93
CUL3-211ENST00000487558 TM2D3Q9BRN9 247 aa3□□□□□ -1.93
CUL3-211ENST00000487558 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
CUL3-211ENST00000487558 DRC3Q9H069 523 aa3□□□□□ -1.93
CUL3-211ENST00000487558 UBQLN4Q9NRR5 601 aa3□□□□□ -1.93
CUL3-211ENST00000487558 NKIRAS1Q9NYS0 192 aa3□□□□□ -1.93
CUL3-211ENST00000487558 ZNF443Q9Y2A4 671 aaPredicted RBP3□□□□□ -1.93
CUL3-211ENST00000487558 PHLDA3Q9Y5J5 127 aa3□□□□□ -1.93
CUL3-211ENST00000487558 CLUHO75153 1309 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 GGTLC3B5MD39 225 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 KLRC4-KLRK1H3BQV0 150 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 ZW10O43264 779 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 EEF1E1O43324 174 aaKnown RBP2.99□□□□□ -1.93
CUL3-211ENST00000487558 HPGDSO60760 199 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 ADAP1O75689 374 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 CTLA4P16410 223 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 ADORA1P30542 326 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 GRPRP30550 384 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 AGTR1P30556 359 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 MED21Q13503 144 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 C1DQ13901 141 aaKnown RBP2.99□□□□□ -1.93
CUL3-211ENST00000487558 SLC9A3R2Q15599 337 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 TBC1D28Q2M2D7 210 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 PYDC2Q56P42 97 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 XKRXQ6PP77 449 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 SCGB1D4Q6XE38 83 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 ZNF664Q8N3J9 261 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 OR11G2Q8NGC1 345 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 ZNRF2Q8NHG8 242 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 DNAJB3Q8WWF6 145 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 EBNA1BP2Q99848 306 aaKnown RBP2.99□□□□□ -1.93
CUL3-211ENST00000487558 RTBDNQ9BSG5 229 aaPredicted RBP2.99□□□□□ -1.93
CUL3-211ENST00000487558 ARL6Q9H0F7 186 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 GLS2Q9UI32 602 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 RPUSD1Q9UJJ7 312 aaKnown RBP2.99□□□□□ -1.93
CUL3-211ENST00000487558 U3KQK5 164 aa2.99□□□□□ -1.93
CUL3-211ENST00000487558 BRD4O60885 1362 aaPredicted RBP2.99□□□□□ -1.93
CUL3-211ENST00000487558 ATP8B1O43520 1251 aa2.98□□□□□ -1.93
CUL3-211ENST00000487558 STX10O60499 249 aa2.98□□□□□ -1.93
CUL3-211ENST00000487558 SH2D1AO60880 128 aa2.98□□□□□ -1.93
CUL3-211ENST00000487558 CPSF4O95639 269 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms