RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 CASQ2O14958 399 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-215ENST00000484203 SPINT2O43291 252 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 ORC5O43913 435 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 CHST1O43916 411 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 CLIC3O95833 236 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 UBBP0CG47 229 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 SLC6A1P30531 599 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 GLP1RP43220 463 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 SOX2P48431 317 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 ETV1P50549 477 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 WNT4P56705 351 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 RBM11P57052 281 aaKnown RBP4.94□□□□□ -1.62
PTCD3-215ENST00000484203 ADARB1P78563 741 aaKnown RBP4.94□□□□□ -1.62
PTCD3-215ENST00000484203 DEFA6Q01524 100 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 ST3GAL4Q11206 333 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 GPR50Q13585 617 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 ATXN7L3Q14CW9 347 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-215ENST00000484203 RCN1Q15293 331 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 LRRC36Q1X8D7 754 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 PDLIM3Q53GG5 364 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-215ENST00000484203 C6orf183Q5T699 404 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 TPTE2P1Q5T6R2 138 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 PRAMEF5Q5TYX0 476 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 RNLSQ5VYX0 342 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 ZNF554Q86TJ5 538 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 OR10X1Q8NGY0 326 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 FAM110DQ8TAY7 271 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-215ENST00000484203 ST8SIA2Q92186 375 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 TAF15Q92804 592 aaKnown RBP eCLIP4.94□□□□□ -1.62
PTCD3-215ENST00000484203 MYDGFQ969H8 173 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 TOMM40LQ969M1 308 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 COQ2Q96H96 371 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 RBM14Q96PK6 669 aaKnown RBP4.94□□□□□ -1.62
PTCD3-215ENST00000484203 SPACA5Q96QH8 159 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 NR1H4Q96RI1 486 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-215ENST00000484203 DPCDQ9BVM2 203 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-215ENST00000484203 CST11Q9H112 138 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 VCX3BQ9H321 246 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 DCLRE1BQ9H816 532 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 ZNF702PQ9H963 129 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 SCN3BQ9NY72 215 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 TAS2R4Q9NYW5 299 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 CALYQ9NYX4 217 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 IDI2-AS1Q9NZ38 188 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 ING4Q9UNL4 249 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 LRRC42Q9Y546 428 aa4.94□□□□□ -1.62
PTCD3-215ENST00000484203 TRAV24A0A0B4J272 114 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 LY6LH3BQJ8 138 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 J3QR06 171 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 FGF16O43320 207 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 TXNL1O43396 289 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 DUS4LO95620 317 aaKnown RBP4.93□□□□□ -1.62
PTCD3-215ENST00000484203 TGP01266 2768 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 GAPDHP04406 335 aaKnown RBP4.93□□□□□ -1.62
PTCD3-215ENST00000484203 CGB3P0DN86 165 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 CGB7P0DN87 165 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 CALCBP10092 127 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 IGFBP3P17936 291 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-215ENST00000484203 NFYBP25208 207 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 PSMA1P25786 263 aaKnown RBP4.93□□□□□ -1.62
PTCD3-215ENST00000484203 OR3A4PP47883 348 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 RAB13P51153 203 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 GTF2A1P52655 376 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-215ENST00000484203 KRTAP10-3P60369 221 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 SRSF4Q08170 494 aaKnown RBP4.93□□□□□ -1.62
PTCD3-215ENST00000484203 SMN1Q16637 294 aaKnown RBP4.93□□□□□ -1.62
PTCD3-215ENST00000484203 C17orf58Q2M2W7 97 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 SLC22A6Q4U2R8 563 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 PLA1AQ53H76 456 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 OGFRL1Q5TC84 451 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-215ENST00000484203 OR2G6Q5TZ20 316 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 RSBN1Q5VWQ0 802 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-215ENST00000484203 Q6ZRM9 215 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 CENPVQ7Z7K6 275 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-215ENST00000484203 DYNAPQ8N1N2 210 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 JAGN1Q8N5M9 183 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 COMMD1Q8N668 190 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 SUMF2Q8NBJ7 301 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 OR4X2Q8NGF9 303 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 OR8H1Q8NGG4 311 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 NEK7Q8TDX7 302 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 PHYHIPQ92561 330 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 GGHQ92820 318 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 ZNF184Q99676 751 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-215ENST00000484203 SLC25A33Q9BSK2 321 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 MND1Q9BWT6 205 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 GON7Q9BXV9 100 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 GPR61Q9BZJ8 451 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 SERTAD4Q9NUC0 356 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 AASSQ9UDR5 926 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 ZMAT5Q9UDW3 170 aaKnown RBP4.93□□□□□ -1.62
PTCD3-215ENST00000484203 PSORS1C1Q9UIG5 152 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 KIF25Q9UIL4 384 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 MOB4Q9Y3A3 225 aa4.93□□□□□ -1.62
PTCD3-215ENST00000484203 TRBV5-7A0A0A0MS05 114 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 FAM90A9PA6NNJ1 464 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 AIPO00170 330 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 HSPB6O14558 160 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 MMP23AO75900 390 aa4.92□□□□□ -1.62
PTCD3-215ENST00000484203 RGS11O94810 467 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms