RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CHST5Q9GZS9 411 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 HDHD2Q9H0R4 259 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 FBXL15Q9H469 300 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 KCNIP2Q9NS61 270 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 RPUSD1Q9UJJ7 312 aaKnown RBP1.54□□□□□ -2.16
HDAC6-212ENST00000461608 SCML1Q9UN30 329 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 BTRCQ9Y297 605 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 ZNF443Q9Y2A4 671 aaPredicted RBP1.54□□□□□ -2.16
HDAC6-212ENST00000461608 PUS1Q9Y606 427 aaKnown RBP eCLIP1.54□□□□□ -2.16
HDAC6-212ENST00000461608 RAB3GAP2Q9H2M9 1393 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 SSH2Q76I76 1423 aa1.54□□□□□ -2.16
HDAC6-212ENST00000461608 A0A1B0GU33 70 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 VWA8A3KMH1 1905 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 A6NED7 52 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 C8orf87E5RJ46 101 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 F5H5T6 163 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 GOLGA8RI6L899 631 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 AQP9O43315 295 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 NDUFS6O75380 124 aaKnown RBP1.53□□□□□ -2.16
HDAC6-212ENST00000461608 CBR3O75828 277 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 BRI3O95415 125 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 IGHMP01871 453 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 OPN1SWP03999 348 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 CGB3P0DN86 165 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 CGB7P0DN87 165 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 NEFHP12036 1026 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 GABRA1P14867 456 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 HIST1H1CP16403 213 aaKnown RBP1.53□□□□□ -2.16
HDAC6-212ENST00000461608 CFL1P23528 166 aaKnown RBP1.53□□□□□ -2.16
HDAC6-212ENST00000461608 COL8A2P25067 703 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 MED21Q13503 144 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 MAPK14Q16539 360 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 C10orf91Q5T1B1 145 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 RAD50Q92878 1312 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 TAMM41Q96BW9 452 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 SLC25A44Q96H78 314 aaPredicted RBP1.53□□□□□ -2.16
HDAC6-212ENST00000461608 ARL5BQ96KC2 179 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 EBNA1BP2Q99848 306 aaKnown RBP1.53□□□□□ -2.16
HDAC6-212ENST00000461608 UPF3BQ9BZI7 483 aaKnown RBP1.53□□□□□ -2.16
HDAC6-212ENST00000461608 EIF5A2Q9GZV4 153 aaKnown RBP1.53□□□□□ -2.16
HDAC6-212ENST00000461608 ARL6Q9H0F7 186 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 METTL9Q9H1A3 318 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 GLS2Q9UI32 602 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 LINC00527Q9UJ94 153 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 ZNF391Q9UJN7 358 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 FIS1Q9Y3D6 152 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 U3KQK5 164 aa1.53□□□□□ -2.16
HDAC6-212ENST00000461608 PRR14LQ5THK1 2151 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 DAPL1A0PJW8 107 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 FTCDNL1E5RQL4 147 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 CCRL2O00421 344 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 EEF1E1O43324 174 aaKnown RBP1.52□□□□□ -2.17
HDAC6-212ENST00000461608 STX10O60499 249 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 CDS2O95674 445 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 CD99P14209 185 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 S100A2P29034 98 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 CRABP1P29762 137 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 CD79BP40259 229 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 GABARAPL2P60520 117 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 DAD1P61803 113 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 SKP1P63208 163 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 ITGB3BPQ13352 177 aaPredicted RBP1.52□□□□□ -2.17
HDAC6-212ENST00000461608 SLC9A3R2Q15599 337 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 KRTAP25-1Q3LHN0 102 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 DNAL1Q4LDG9 190 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 SPIN4Q56A73 249 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 PYDC2Q56P42 97 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 TMPPEQ6ZT21 453 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 FAM19A3Q7Z5A8 133 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 VN1R4Q7Z5H5 301 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 OR5D18Q8NGL1 313 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 OR4A5Q8NH83 315 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 MAL2Q969L2 176 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 HIST1H2BAQ96A08 127 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 PACRGQ96M98 296 aaPredicted RBP1.52□□□□□ -2.17
HDAC6-212ENST00000461608 ALX4Q9H161 411 aaPredicted RBP1.52□□□□□ -2.17
HDAC6-212ENST00000461608 WDR54Q9H977 334 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 ZNF286AQ9HBT8 521 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 OR5V1Q9UGF6 321 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 VPREB3Q9UKI3 123 aa1.52□□□□□ -2.17
HDAC6-212ENST00000461608 ARAP3Q8WWN8 1544 aa1.51□□□□□ -2.17
HDAC6-212ENST00000461608 NUP153P49790 1475 aaKnown RBP1.51□□□□□ -2.17
HDAC6-212ENST00000461608 BRD4O60885 1362 aaPredicted RBP1.51□□□□□ -2.17
HDAC6-212ENST00000461608 A0A0A6YYH2 397 aa1.51□□□□□ -2.17
HDAC6-212ENST00000461608 FABP12A6NFH5 140 aa1.51□□□□□ -2.17
HDAC6-212ENST00000461608 A6NJ64 397 aa1.51□□□□□ -2.17
HDAC6-212ENST00000461608 B4DEV8 164 aa1.51□□□□□ -2.17
HDAC6-212ENST00000461608 ITGB1BP1O14713 200 aa1.51□□□□□ -2.17
HDAC6-212ENST00000461608 NIPSNAP2O75323 286 aa1.51□□□□□ -2.17
HDAC6-212ENST00000461608 S100A6P06703 90 aa1.51□□□□□ -2.17
HDAC6-212ENST00000461608 GADD45AP24522 165 aa1.51□□□□□ -2.17
HDAC6-212ENST00000461608 PSMA1P25786 263 aaKnown RBP1.51□□□□□ -2.17
HDAC6-212ENST00000461608 EVI2BP34910 448 aa1.51□□□□□ -2.17
HDAC6-212ENST00000461608 GZMMP51124 257 aa1.51□□□□□ -2.17
HDAC6-212ENST00000461608 PSMD7P51665 324 aa1.51□□□□□ -2.17
HDAC6-212ENST00000461608 MGAT3Q09327 533 aa1.51□□□□□ -2.17
HDAC6-212ENST00000461608 LRRC26Q2I0M4 334 aa1.51□□□□□ -2.17
HDAC6-212ENST00000461608 HCP5Q6MZN7 132 aa1.51□□□□□ -2.17
HDAC6-212ENST00000461608 DRAM2Q6UX65 266 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms