RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 DTX3Q8N9I9 347 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 OR13F1Q8NGS4 319 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 OR9G1Q8NH87 305 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 UBALD1Q8TB05 177 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 CREB3L1Q96BA8 519 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 MMP28Q9H239 520 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 OR51E2Q9H255 320 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 KCNK15Q9H427 330 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 TRAPPC2LQ9UL33 140 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 AMMECR1Q9Y4X0 333 aaPredicted RBP11.26□□□□□ -0.61
TREX1-202ENST00000444177 PEX16Q9Y5Y5 336 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 V9GY05 133 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 KIAA2026Q5HYC2 2103 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 PRKDCP78527 4128 aaKnown RBP11.25□□□□□ -0.61
TREX1-202ENST00000444177 TET2Q6N021 2002 aaPredicted RBP11.25□□□□□ -0.61
TREX1-202ENST00000444177 NPIPB11E5RHQ5 1161 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 BUB1B-PAK6H3BSN5 160 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 H3BUI4 141 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 RAB3BP20337 219 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 GADD45AP24522 165 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 HIST2H2BDQ6DRA6 164 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 OR10K2Q6IF99 312 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 KLHDC1Q8N7A1 406 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 C11orf44Q8N8P7 122 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 OR10A7Q8NGE5 316 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 OR4K15Q8NH41 348 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 CFHR4Q92496 578 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 TOMM40LQ969M1 308 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 ARL11Q969Q4 196 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 KCTD7Q96MP8 289 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 GFI1Q99684 422 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 TMEM59Q9BXS4 323 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 PLGRKTQ9HBL7 147 aa11.25□□□□□ -0.61
TREX1-202ENST00000444177 AK6Q9Y3D8 172 aaKnown RBP11.25□□□□□ -0.61
TREX1-202ENST00000444177 SHISA3A0PJX4 238 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 UBE2QL1A1L167 161 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 J3QR06 171 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 SDCBPO00560 298 aaPredicted RBP11.24□□□□□ -0.61
TREX1-202ENST00000444177 TMEM127O75204 238 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 PDCD6O75340 191 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 BPNT1O95861 308 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 MT-ND4P03905 459 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 VSIG10L2P0DP72 767 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 VSIG8P0DPA2 414 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 GZMHP20718 246 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 FUT3P21217 361 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 CD24P25063 80 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 BRS3P32247 399 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 ALDH3B2P48448 385 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 P2RY14Q15391 338 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 C1QL4Q86Z23 238 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 RPEQ96AT9 228 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 CYYR1Q96J86 154 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 CHCHD6Q9BRQ6 235 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 LINC00574Q9H8X3 128 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 ZNF702PQ9H963 129 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 PSG11Q9UQ72 335 aa11.24□□□□□ -0.61
TREX1-202ENST00000444177 IGHV3-43A0A0B4J1X8 118 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 A0A1W2PPE3 182 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 C15orf65H3BRN8 121 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 AIREO43918 545 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 TFAP2AP05549 437 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 IGHV3-43DP0DP04 118 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 MNDAP41218 407 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 RPS27AP62979 156 aaKnown RBP11.23□□□□□ -0.61
TREX1-202ENST00000444177 UNC119Q13432 240 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 RAB11BQ15907 218 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 C6orf183Q5T699 404 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 SIGIRRQ6IA17 410 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 CCDC144NLQ6NUI1 221 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 OR2W3Q7Z3T1 314 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 Q8N2B8 174 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 PRR18Q8N4B5 295 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 OR10X1Q8NGY0 326 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 KCNG3Q8TAE7 436 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 NEDD4LQ96PU5 975 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 SERTAD4Q9NUC0 356 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 STEAP1Q9UHE8 339 aa11.23□□□□□ -0.61
TREX1-202ENST00000444177 LOC100506127A0A0U1RQW1 187 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 IFITM5A6NNB3 132 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 NOTOA8MTQ0 251 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 TMEM14DPA8MWL7 114 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 C12orf77C9JDV5 145 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 LY6LH3BQJ8 138 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 ORC5O43913 435 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 CA11O75493 328 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 GLAP06280 429 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 ARSBP15848 533 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 MADCAM1Q13477 382 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 HABP2Q14520 560 aaPredicted RBP11.22□□□□□ -0.61
TREX1-202ENST00000444177 ARSJQ5FYB0 599 aaPredicted RBP11.22□□□□□ -0.61
TREX1-202ENST00000444177 TRAT1Q6PIZ9 186 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 SLC16A12Q6ZSM3 486 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 CAPSLQ8WWF8 208 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 NICN1Q9BSH3 213 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 CENPOQ9BU64 300 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 FUNDC2Q9BWH2 189 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 RAB9BQ9NP90 201 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 GFOD1Q9NXC2 390 aa11.22□□□□□ -0.61
TREX1-202ENST00000444177 OOSP1A8MZH6 123 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms