RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 CCDC144NLQ6NUI1 221 aa11.87□□□□□ -0.51
LIMS4-201ENST00000413601 TREML4Q6UXN2 200 aa11.87□□□□□ -0.51
LIMS4-201ENST00000413601 GAPTQ8N292 157 aa11.87□□□□□ -0.51
LIMS4-201ENST00000413601 Q8N2B8 174 aa11.87□□□□□ -0.51
LIMS4-201ENST00000413601 KLHDC1Q8N7A1 406 aa11.87□□□□□ -0.51
LIMS4-201ENST00000413601 OR52M1Q8NGK5 317 aa11.87□□□□□ -0.51
LIMS4-201ENST00000413601 OR6M1Q8NGM8 313 aa11.87□□□□□ -0.51
LIMS4-201ENST00000413601 NEDD4LQ96PU5 975 aa11.87□□□□□ -0.51
LIMS4-201ENST00000413601 NICN1Q9BSH3 213 aa11.87□□□□□ -0.51
LIMS4-201ENST00000413601 PRSS22Q9GZN4 317 aa11.87□□□□□ -0.51
LIMS4-201ENST00000413601 PLGRKTQ9HBL7 147 aa11.87□□□□□ -0.51
LIMS4-201ENST00000413601 RRP15Q9Y3B9 282 aaKnown RBP11.87□□□□□ -0.51
LIMS4-201ENST00000413601 TMEM14DPA8MWL7 114 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 SLC17A2O00624 439 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 CA11O75493 328 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 VSIG10L2P0DP72 767 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 CHATP28329 748 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 MNDAP41218 407 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 C6orf183Q5T699 404 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 HIST2H2BDQ6DRA6 164 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 C11orf88Q6PI97 169 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 C6orf201Q7Z4U5 140 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 PRR18Q8N4B5 295 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 DTX3Q8N9I9 347 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 OR10X1Q8NGY0 326 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 OR1L1Q8NH94 360 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 SULT4A1Q9BR01 284 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 FAAP24Q9BTP7 215 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 SERTAD4Q9NUC0 356 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 NDUFB11Q9NX14 153 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 GFOD1Q9NXC2 390 aa11.86□□□□□ -0.51
LIMS4-201ENST00000413601 M0QZ24 198 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 SPINT2O43291 252 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 MRPS14O60783 128 aaKnown RBP11.85□□□□□ -0.51
LIMS4-201ENST00000413601 HBZP02008 142 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 ARSBP15848 533 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 CLDN12P56749 244 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 HERPUD1Q15011 391 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 RAB11BQ15907 218 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 ARSJQ5FYB0 599 aaPredicted RBP11.85□□□□□ -0.51
LIMS4-201ENST00000413601 Q6ZTK2 550 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 C5orf24Q7Z6I8 188 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 SPARTQ8N0X7 666 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 SVOPQ8N4V2 548 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 C11orf44Q8N8P7 122 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 OR56B4Q8NH76 319 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 MRPL30Q8TCC3 161 aaKnown RBP11.85□□□□□ -0.51
LIMS4-201ENST00000413601 CAPSLQ8WWF8 208 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 SLC25A33Q9BSK2 321 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 TM2D1Q9BX74 207 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 LIN7BQ9HAP6 207 aa11.85□□□□□ -0.51
LIMS4-201ENST00000413601 PKD1L1Q8TDX9 2849 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 A0A0A6YYD4 124 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 A0A1W2PPI3 338 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 SNRNP70P08621 437 aaKnown RBP11.84□□□□□ -0.51
LIMS4-201ENST00000413601 BLVRBP30043 206 aaPredicted RBP11.84□□□□□ -0.51
LIMS4-201ENST00000413601 RAB7AP51149 207 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 TMEM95Q3KNT9 176 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 UBE2UQ5VVX9 321 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 TRAT1Q6PIZ9 186 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 C16orf82Q7Z2V1 217 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 OR2W3Q7Z3T1 314 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 DRAM1Q8N682 238 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 OR51D1Q8NGF3 324 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 OR10V1Q8NGI7 309 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 CFHR4Q92496 578 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 RBM14Q96PK6 669 aaKnown RBP11.84□□□□□ -0.51
LIMS4-201ENST00000413601 YTHDF1Q9BYJ9 559 aaKnown RBP11.84□□□□□ -0.51
LIMS4-201ENST00000413601 LPAR5Q9H1C0 372 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 TAF9BQ9HBM6 251 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 RAB9BQ9NP90 201 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 MBNL3Q9NUK0 354 aaKnown RBP11.84□□□□□ -0.51
LIMS4-201ENST00000413601 KCNIP1Q9NZI2 227 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 GNG12Q9UBI6 72 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 LRRC42Q9Y546 428 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 V9GY05 133 aa11.84□□□□□ -0.51
LIMS4-201ENST00000413601 SHISA3A0PJX4 238 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 FAM90A9PA6NNJ1 464 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 HSD17B6O14756 317 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 SLC31A2O15432 143 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 SOCS1O15524 211 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 OR2F2O95006 317 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 FAM106CPP0CH98 169 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 REG1BP48304 166 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 ZNF134P52741 427 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 C2orf76Q3KRA6 126 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 ABCA11PQ4W5N1 156 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 HES5Q5TA89 166 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 CD200R1LQ6Q8B3 271 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 THNSL2Q86YJ6 484 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 OR8H3Q8N146 312 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 LINC00311Q8N616 119 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 C8orf31Q8N9H6 132 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 ZNF439Q8NDP4 499 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 FAM3DQ96BQ1 224 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 AKR1E2Q96JD6 320 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 OCSTAMPQ9BR26 566 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 PLEKHJ1Q9NW61 149 aa11.83□□□□□ -0.52
LIMS4-201ENST00000413601 TRAV1-2A0A0B4J238 106 aa11.82□□□□□ -0.52
LIMS4-201ENST00000413601 TRDV1A0A1B0GX56 115 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms