RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ZNF107Q9UII5 783 aaPredicted RBP11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 TENM2Q9NT68 2774 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 I3L521 148 aa11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 GEMIN2O14893 280 aaKnown RBP11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 TXNL1O43396 289 aa11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 SLC2A2P11168 524 aaPredicted RBP11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 LYL1P12980 280 aa11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 MYF6P23409 242 aa11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 GBX2P52951 348 aaPredicted RBP11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ZNF616Q08AN1 781 aa11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 KIAA0141Q14154 515 aaPredicted RBP11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 NHLRC3Q5JS37 347 aa11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ASPHD1Q5U4P2 390 aa11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 C1orf146Q5VVC0 180 aa11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 SLC25A48Q6ZT89 311 aaKnown RBP11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 OVCH2Q7RTZ1 564 aa11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 MYOZ3Q8TDC0 251 aa11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 CHCHD6Q9BRQ6 235 aa11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 JAM3Q9BX67 310 aa11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 GAR1Q9NY12 217 aaKnown RBP11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ZNF580Q9UK33 172 aa11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 WSB1Q9Y6I7 421 aa11.08□□□□□ -0.64
HLA-DQB2-229ENST00000411527 G3V318 75 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 AIPO00170 330 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 MT-ND4P03905 459 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 SERPINA2P20848 420 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 PPIFP30405 207 aaKnown RBP11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 VHLP40337 213 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ZNF134P52741 427 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 GNB1P62873 340 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 MRPL28Q13084 256 aaKnown RBP11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ZIK1Q3SY52 487 aaPredicted RBP11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 Q3ZCU0 254 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 CT45A1Q5HYN5 189 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ZNF429Q86V71 674 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ZNF439Q8NDP4 499 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 CT45A3Q8NHU0 189 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 DCUN1D4Q92564 292 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 S100A13Q99584 98 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 PALMDQ9NP74 551 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ERVK13-1Q9NX77 482 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 IL36GQ9NZH8 169 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 GNG12Q9UBI6 72 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 VSIG4Q9Y279 399 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ORC6Q9Y5N6 252 aa11.07□□□□□ -0.64
HLA-DQB2-229ENST00000411527 SACSQ9NZJ4 4579 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 C12orf77C9JDV5 145 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 OVOL1O14753 267 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 SAP30O75446 220 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 FADS2O95864 444 aaKnown RBP11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ALPLP05186 524 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 CD2P06729 351 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 FRMD6-AS1P0C7T7 363 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ZNF93P35789 620 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 GTF2A1P52655 376 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ZNF137PP52743 207 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 RUNX1Q01196 453 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 GABPB1Q06547 395 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 MMDQ15546 238 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ZNF497Q6ZNH5 498 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 LINC00596Q86U02 117 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 STX19Q8N4C7 294 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 OR10V1Q8NGI7 309 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 RGP1Q92546 391 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ZMAT4Q9H898 229 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 AMBNQ9NP70 447 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ISYNA1Q9NPH2 558 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 PAK1IP1Q9NWT1 392 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 EPPK1P58107 5090 aaKnown RBP11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 DNAH7Q8WXX0 4024 aa11.06□□□□□ -0.64
HLA-DQB2-229ENST00000411527 SPINT2O43291 252 aa11.05□□□□□ -0.64
HLA-DQB2-229ENST00000411527 IGLV1-40P01703 118 aa11.05□□□□□ -0.64
HLA-DQB2-229ENST00000411527 SPNP16150 400 aa11.05□□□□□ -0.64
HLA-DQB2-229ENST00000411527 RAB9AP51151 201 aa11.05□□□□□ -0.64
HLA-DQB2-229ENST00000411527 LSAMPQ13449 338 aa11.05□□□□□ -0.64
HLA-DQB2-229ENST00000411527 MPV17LQ2QL34 196 aa11.05□□□□□ -0.64
HLA-DQB2-229ENST00000411527 SYT6Q5T7P8 510 aaPredicted RBP11.05□□□□□ -0.64
HLA-DQB2-229ENST00000411527 DDI2Q5TDH0 399 aa11.05□□□□□ -0.64
HLA-DQB2-229ENST00000411527 PRR18Q8N4B5 295 aa11.05□□□□□ -0.64
HLA-DQB2-229ENST00000411527 GPR148Q8TDV2 347 aa11.05□□□□□ -0.64
HLA-DQB2-229ENST00000411527 TMEM106AQ96A25 262 aa11.05□□□□□ -0.64
HLA-DQB2-229ENST00000411527 OR51J1Q9H342 316 aa11.05□□□□□ -0.64
HLA-DQB2-229ENST00000411527 TMEM138Q9NPI0 162 aa11.05□□□□□ -0.64
HLA-DQB2-229ENST00000411527 PARP11Q9NR21 331 aa11.05□□□□□ -0.64
HLA-DQB2-229ENST00000411527 TRAPPC2LQ9UL33 140 aa11.05□□□□□ -0.64
HLA-DQB2-229ENST00000411527 TRAV41A0A0B4J266 112 aa11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 LCE6AA0A183 80 aa11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 A0A1W2PP11 408 aa11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 EI24O14681 340 aa11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ATP6V0E1O15342 81 aa11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 HBZP02008 142 aa11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 GTF2F2P13984 249 aa11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 GABRB1P18505 474 aa11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 PPP3R1P63098 170 aa11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 SLC22A6Q4U2R8 563 aa11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 OR4K15Q8NH41 348 aa11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 OR1L1Q8NH94 360 aa11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 DLX4Q92988 240 aaPredicted RBP11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 ORAI1Q96D31 301 aa11.04□□□□□ -0.64
HLA-DQB2-229ENST00000411527 RITA1Q96K30 269 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms