RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CFPP27918 469 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 GNG10P50151 68 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 LSM3P62310 102 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 LY6EQ16553 131 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 AANATQ16613 207 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 NR2C2APQ86WQ0 139 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 GAPTQ8N292 157 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 OR4P4Q8NGL7 312 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 MRPL30Q8TCC3 161 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 RIMS4Q9H426 269 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 VPREB3Q9UKI3 123 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 HSF4Q9ULV5 492 aa20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 AMMECR1Q9Y4X0 333 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-207ENST00000397411 C12orf77C9JDV5 145 aa20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 J3QR06 171 aa20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 ARHGDIBP52566 201 aa20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 MRPS15P82914 257 aaKnown RBP20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 FOXL1Q12952 345 aa20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 PLA2G7Q13093 441 aa20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 HLA-DRB5Q30154 266 aa20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 SFXN4Q6P4A7 337 aa20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 DYNAPQ8N1N2 210 aa20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 OR52M1Q8NGK5 317 aa20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 ARHGAP5-AS1Q96IT6 56 aa20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 ATG5Q9H1Y0 275 aa20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 TAF9BQ9HBM6 251 aa20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 GNG12Q9UBI6 72 aa20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 AK3Q9UIJ7 227 aa20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 PSG11Q9UQ72 335 aa20.53■□□□□ 0.88
TSPAN4-207ENST00000397411 IGHV3-43A0A0B4J1X8 118 aa20.52■□□□□ 0.88
TSPAN4-207ENST00000397411 IGLV1-47P01700 117 aa20.52■□□□□ 0.88
TSPAN4-207ENST00000397411 HBZP02008 142 aa20.52■□□□□ 0.88
TSPAN4-207ENST00000397411 IGHV3-43DP0DP04 118 aa20.52■□□□□ 0.88
TSPAN4-207ENST00000397411 EFNB2P52799 333 aa20.52■□□□□ 0.88
TSPAN4-207ENST00000397411 IDNKQ5T6J7 187 aa20.52■□□□□ 0.88
TSPAN4-207ENST00000397411 OR1L1Q8NH94 360 aa20.52■□□□□ 0.88
TSPAN4-207ENST00000397411 RAB3CQ96E17 227 aa20.52■□□□□ 0.88
TSPAN4-207ENST00000397411 CYYR1Q96J86 154 aa20.52■□□□□ 0.88
TSPAN4-207ENST00000397411 PECRQ9BY49 303 aa20.52■□□□□ 0.88
TSPAN4-207ENST00000397411 MMP28Q9H239 520 aa20.52■□□□□ 0.88
TSPAN4-207ENST00000397411 ABRACLQ9P1F3 81 aa20.52■□□□□ 0.88
TSPAN4-207ENST00000397411 BUB1B-PAK6H3BSN5 160 aa20.51■□□□□ 0.87
TSPAN4-207ENST00000397411 RAB13P51153 203 aa20.51■□□□□ 0.87
TSPAN4-207ENST00000397411 TMEM50BP56557 158 aa20.51■□□□□ 0.87
TSPAN4-207ENST00000397411 LDLRAD2Q5SZI1 272 aa20.51■□□□□ 0.87
TSPAN4-207ENST00000397411 UTF1Q5T230 341 aa20.51■□□□□ 0.87
TSPAN4-207ENST00000397411 OR10X1Q8NGY0 326 aa20.51■□□□□ 0.87
TSPAN4-207ENST00000397411 PTX4Q96A99 478 aa20.51■□□□□ 0.87
TSPAN4-207ENST00000397411 CMSS1Q9BQ75 279 aaKnown RBP20.51■□□□□ 0.87
TSPAN4-207ENST00000397411 MRPS26Q9BYN8 205 aaKnown RBP20.51■□□□□ 0.87
TSPAN4-207ENST00000397411 GFOD1Q9NXC2 390 aa20.51■□□□□ 0.87
TSPAN4-207ENST00000397411 F2RL2O00254 374 aa20.5■□□□□ 0.87
TSPAN4-207ENST00000397411 SNRPBP14678 240 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-207ENST00000397411 RPL15P61313 204 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-207ENST00000397411 TMEM30BQ3MIR4 351 aa20.5■□□□□ 0.87
TSPAN4-207ENST00000397411 DHRS7BQ6IAN0 325 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-207ENST00000397411 ZNF554Q86TJ5 538 aa20.5■□□□□ 0.87
TSPAN4-207ENST00000397411 OR10R2Q8NGX6 335 aa20.5■□□□□ 0.87
TSPAN4-207ENST00000397411 RPEQ96AT9 228 aa20.5■□□□□ 0.87
TSPAN4-207ENST00000397411 FUNDC2Q9BWH2 189 aa20.5■□□□□ 0.87
TSPAN4-207ENST00000397411 MBNL3Q9NUK0 354 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-207ENST00000397411 A0A075B6Q4 140 aa20.49■□□□□ 0.87
TSPAN4-207ENST00000397411 A0A1W2PPE3 182 aa20.49■□□□□ 0.87
TSPAN4-207ENST00000397411 CD3GP09693 182 aa20.49■□□□□ 0.87
TSPAN4-207ENST00000397411 SMIM18P0DKX4 95 aa20.49■□□□□ 0.87
TSPAN4-207ENST00000397411 BRS3P32247 399 aa20.49■□□□□ 0.87
TSPAN4-207ENST00000397411 TPTE2P1Q5T6R2 138 aa20.49■□□□□ 0.87
TSPAN4-207ENST00000397411 TAF15Q92804 592 aaKnown RBP eCLIP20.49■□□□□ 0.87
TSPAN4-207ENST00000397411 GALMQ96C23 342 aa20.49■□□□□ 0.87
TSPAN4-207ENST00000397411 OR2S2Q9NQN1 319 aa20.49■□□□□ 0.87
TSPAN4-207ENST00000397411 FOXI3A8MTJ6 420 aaPredicted RBP20.48■□□□□ 0.87
TSPAN4-207ENST00000397411 VGLL3A8MV65 326 aa20.48■□□□□ 0.87
TSPAN4-207ENST00000397411 MNDAP41218 407 aa20.48■□□□□ 0.87
TSPAN4-207ENST00000397411 PLAC9Q5JTB6 97 aa20.48■□□□□ 0.87
TSPAN4-207ENST00000397411 CCDC144NLQ6NUI1 221 aa20.48■□□□□ 0.87
TSPAN4-207ENST00000397411 MOB1BQ7L9L4 216 aa20.48■□□□□ 0.87
TSPAN4-207ENST00000397411 OR10V1Q8NGI7 309 aa20.48■□□□□ 0.87
TSPAN4-207ENST00000397411 OR13F1Q8NGS4 319 aa20.48■□□□□ 0.87
TSPAN4-207ENST00000397411 OR4F5Q8NH21 305 aa20.48■□□□□ 0.87
TSPAN4-207ENST00000397411 RAB18Q9NP72 206 aa20.48■□□□□ 0.87
TSPAN4-207ENST00000397411 PITPNC1Q9UKF7 332 aa20.48■□□□□ 0.87
TSPAN4-207ENST00000397411 NAPSAO96009 420 aa20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 TGFBR1P36897 503 aa20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 RAG2P55895 527 aa20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 LOXL3P58215 753 aa20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 MADCAM1Q13477 382 aa20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 MOGAT2Q3SYC2 334 aa20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 CROCCP3Q8IVE0 287 aa20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 C3orf56Q8N813 242 aa20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 LGALS14Q8TCE9 139 aa20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 IL1F10Q8WWZ1 152 aa20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 TOMM40LQ969M1 308 aa20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 PHF21AQ96BD5 680 aa20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 HDHD3Q9BSH5 251 aaPredicted RBP20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 C12orf4Q9NQ89 552 aa20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 C1RLQ9NZP8 487 aa20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 MGAT4AQ9UM21 535 aa20.47■□□□□ 0.87
TSPAN4-207ENST00000397411 OOSP1A8MZH6 123 aa20.46■□□□□ 0.87
TSPAN4-207ENST00000397411 IL3RAP26951 378 aa20.46■□□□□ 0.87
TSPAN4-207ENST00000397411 TALDO1P37837 337 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms