RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 GPX5O75715 221 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 GLAP06280 429 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 FSTP19883 344 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 VDAC1P21796 283 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 HOXD3P31249 432 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-204ENST00000376643 GPR50Q13585 617 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 Q499Y3 187 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 SLC22A6Q4U2R8 563 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 ZNF497Q6ZNH5 498 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 ZNF554Q86TJ5 538 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 OR5M8Q8NGP6 311 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 APH1BQ8WW43 257 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 RTN4IP1Q8WWV3 396 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-204ENST00000376643 RGP1Q92546 391 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-204ENST00000376643 P2RX4Q99571 388 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 ZNF580Q9UK33 172 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 WI2-2373I1.2A0A1W2PRP0 233 aa11.63□□□□□ -0.55
HDAC6-204ENST00000376643 CCL24O00175 119 aa11.63□□□□□ -0.55
HDAC6-204ENST00000376643 MT-ND4P03905 459 aa11.63□□□□□ -0.55
HDAC6-204ENST00000376643 NHLRC4P0CG21 123 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-204ENST00000376643 CDX1P47902 265 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-204ENST00000376643 ZNF137PP52743 207 aa11.63□□□□□ -0.55
HDAC6-204ENST00000376643 KRTAP10-11P60412 298 aa11.63□□□□□ -0.55
HDAC6-204ENST00000376643 DIAPH2-AS1Q14236 149 aa11.63□□□□□ -0.55
HDAC6-204ENST00000376643 UTF1Q5T230 341 aa11.63□□□□□ -0.55
HDAC6-204ENST00000376643 TTC23Q5W5X9 447 aa11.63□□□□□ -0.55
HDAC6-204ENST00000376643 Q8N6K4 173 aa11.63□□□□□ -0.55
HDAC6-204ENST00000376643 NKAIN3Q8N8D7 197 aa11.63□□□□□ -0.55
HDAC6-204ENST00000376643 ETAA1Q9NY74 926 aa11.63□□□□□ -0.55
HDAC6-204ENST00000376643 KCNIP1Q9NZI2 227 aa11.63□□□□□ -0.55
HDAC6-204ENST00000376643 TRBV5-5A0A0J9YX44 114 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 A0A1W2PPE3 182 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 IGFBP3P17936 291 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-204ENST00000376643 MAPK3P27361 379 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-204ENST00000376643 SOX6P35712 828 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 REG1BP48304 166 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 ETV1P50549 477 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 RAB25P57735 213 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 KIR2DS1Q14954 304 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 C9orf66Q5T8R8 295 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 OR2G6Q5TZ20 316 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 AWAT2Q6E213 333 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 SLC25A48Q6ZT89 311 aaKnown RBP11.62□□□□□ -0.55
HDAC6-204ENST00000376643 JAGN1Q8N5M9 183 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 RNF152Q8N8N0 203 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 Q8N9W7 124 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 CCDC107Q8WV48 283 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 GHSRQ92847 366 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 TMEM80Q96HE8 168 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 WWC2-AS2Q96NR7 200 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 S1PR3Q99500 378 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 SLC29A1Q99808 456 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 RCC2Q9P258 522 aaKnown RBP11.62□□□□□ -0.55
HDAC6-204ENST00000376643 GHRLQ9UBU3 117 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 MRPS28Q9Y2Q9 187 aaKnown RBP11.62□□□□□ -0.55
HDAC6-204ENST00000376643 LRRC42Q9Y546 428 aa11.62□□□□□ -0.55
HDAC6-204ENST00000376643 IGHV3-72A0A0B4J1Y9 119 aa11.61□□□□□ -0.55
HDAC6-204ENST00000376643 TRAV39A0A0B4J263 110 aa11.61□□□□□ -0.55
HDAC6-204ENST00000376643 LANCL1O43813 399 aa11.61□□□□□ -0.55
HDAC6-204ENST00000376643 WBP4O75554 376 aaKnown RBP11.61□□□□□ -0.55
HDAC6-204ENST00000376643 RGS11O94810 467 aa11.61□□□□□ -0.55
HDAC6-204ENST00000376643 SYT6Q5T7P8 510 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-204ENST00000376643 DMKNQ6E0U4 476 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-204ENST00000376643 RAB12Q6IQ22 244 aa11.61□□□□□ -0.55
HDAC6-204ENST00000376643 TMEM104Q8NE00 496 aa11.61□□□□□ -0.55
HDAC6-204ENST00000376643 ST6GALNAC6Q969X2 333 aa11.61□□□□□ -0.55
HDAC6-204ENST00000376643 DCLRE1BQ9H816 532 aa11.61□□□□□ -0.55
HDAC6-204ENST00000376643 LINC00527Q9UJ94 153 aa11.61□□□□□ -0.55
HDAC6-204ENST00000376643 EFCAB10A6NFE3 127 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 C12orf77C9JDV5 145 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 BAG2O95816 211 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 IGHG4P01861 327 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 IGF1P05019 195 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 FUT3P21217 361 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 CAPGP40121 348 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 DOC2BQ14184 412 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 XAF1Q6GPH4 301 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 GLIPR1L1Q6UWM5 242 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 C4orf3Q8WVX3 66 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 MUL1Q969V5 352 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 UQCC2Q9BRT2 126 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 CST11Q9H112 138 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 JPT1Q9UK76 154 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 ERGIC3Q9Y282 383 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 PEX16Q9Y5Y5 336 aa11.6□□□□□ -0.55
HDAC6-204ENST00000376643 IGHV3-43A0A0B4J1X8 118 aa11.59□□□□□ -0.55
HDAC6-204ENST00000376643 HBZP02008 142 aa11.59□□□□□ -0.55
HDAC6-204ENST00000376643 CD1AP06126 327 aa11.59□□□□□ -0.55
HDAC6-204ENST00000376643 UBBP0CG47 229 aa11.59□□□□□ -0.55
HDAC6-204ENST00000376643 IGHV3-43DP0DP04 118 aa11.59□□□□□ -0.55
HDAC6-204ENST00000376643 INSL3P51460 131 aa11.59□□□□□ -0.55
HDAC6-204ENST00000376643 SMN1Q16637 294 aaKnown RBP11.59□□□□□ -0.55
HDAC6-204ENST00000376643 TMEM65Q6PI78 240 aa11.59□□□□□ -0.55
HDAC6-204ENST00000376643 GAPTQ8N292 157 aa11.59□□□□□ -0.55
HDAC6-204ENST00000376643 PRR18Q8N4B5 295 aa11.59□□□□□ -0.55
HDAC6-204ENST00000376643 FAM71E2Q8N5Q1 922 aa11.59□□□□□ -0.55
HDAC6-204ENST00000376643 PACRGLQ8N7B6 248 aa11.59□□□□□ -0.55
HDAC6-204ENST00000376643 RAX2Q96IS3 184 aa11.59□□□□□ -0.55
HDAC6-204ENST00000376643 OR2S2Q9NQN1 319 aa11.59□□□□□ -0.55
HDAC6-204ENST00000376643 CNOT2Q9NZN8 540 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms