RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 UFSP2Q9NUQ7 469 aa12.58□□□□□ -0.4
LMO4-201ENST00000370542 ZNF346Q9UL40 294 aaKnown RBP12.58□□□□□ -0.4
LMO4-201ENST00000370542 STARD10Q9Y365 291 aa12.58□□□□□ -0.4
LMO4-201ENST00000370542 TMED3Q9Y3Q3 217 aa12.58□□□□□ -0.4
LMO4-201ENST00000370542 BORCS7-ASMTA0A0B4J1R7 106 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 TMEM235A6NFC5 223 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 A6NIZ1 184 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 RAB27BO00194 218 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 TSPAN15O95858 294 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 ALDH3B1P43353 468 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 PPT1P50897 306 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 TAS2R46P59540 309 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 RAP1BP61224 184 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 RAP1AP62834 184 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 SRSF3P84103 164 aaKnown RBP12.57□□□□□ -0.4
LMO4-201ENST00000370542 LBHQ53QV2 105 aaPredicted RBP12.57□□□□□ -0.4
LMO4-201ENST00000370542 TMEM268Q5VZI3 342 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 RHOUQ7L0Q8 258 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 LYPD6Q86Y78 171 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 POC1AQ8NBT0 407 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 PLPP7Q8NBV4 271 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 CHST4Q8NCG5 386 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 NOXO1Q8NFA2 376 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 OR8G5Q8NG78 346 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 RAB3CQ96E17 227 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 TOLLIPQ9H0E2 274 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 TENM1Q9UKZ4 2725 aa12.57□□□□□ -0.4
LMO4-201ENST00000370542 PRSS37A4D1T9 235 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 B4DSR2 109 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 FAM157AC9JC47 383 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 HLA-DQA2P01906 255 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 S100A2P29034 98 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 CD80P33681 288 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 RPL27P61353 136 aaKnown RBP12.56□□□□□ -0.4
LMO4-201ENST00000370542 MRPS34P82930 218 aaKnown RBP12.56□□□□□ -0.4
LMO4-201ENST00000370542 SRSF2Q01130 221 aaKnown RBP12.56□□□□□ -0.4
LMO4-201ENST00000370542 DHRS11Q6UWP2 260 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 SLC16A14Q7RTX9 510 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 DCXRQ7Z4W1 244 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 UBAC2Q8NBM4 344 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 OR56B1Q8NGI3 324 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 CLDND2Q8NHS1 167 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 ZNF519Q8TB69 540 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 EMG1Q92979 244 aaKnown RBP12.56□□□□□ -0.4
LMO4-201ENST00000370542 NABP1Q96AH0 204 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 TSSK2Q96PF2 358 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 CLCC1Q96S66 551 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 BCL2L14Q9BZR8 327 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 TMEM231Q9H6L2 316 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 METTL8Q9H825 291 aaKnown RBP12.56□□□□□ -0.4
LMO4-201ENST00000370542 C1orf123Q9NWV4 160 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 GHRLQ9UBU3 117 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 OR52A1Q9UKL2 312 aa12.56□□□□□ -0.4
LMO4-201ENST00000370542 ELOA3CA0A087WX78 387 aaPredicted RBP12.55□□□□□ -0.4
LMO4-201ENST00000370542 C7orf77A4D0Y5 90 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 C17orf100A8MU93 164 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 H0YIZ8 118 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 CA11O75493 328 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 SRSF10O75494 262 aaKnown RBP12.55□□□□□ -0.4
LMO4-201ENST00000370542 F13BP05160 661 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 ZNF823P16415 610 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 HRH1P35367 487 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 GPR6P46095 362 aaPredicted RBP12.55□□□□□ -0.4
LMO4-201ENST00000370542 HTR5AP47898 357 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 DAP3P51398 398 aaKnown RBP12.55□□□□□ -0.4
LMO4-201ENST00000370542 CLRN1P58418 232 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 LMO4P61968 165 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 DEFA6Q01524 100 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 IL15RAQ13261 267 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 EIF2B1Q14232 305 aaKnown RBP12.55□□□□□ -0.4
LMO4-201ENST00000370542 Q3ZCU0 254 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 PDLIM3Q53GG5 364 aaPredicted RBP12.55□□□□□ -0.4
LMO4-201ENST00000370542 CPEB3Q8NE35 698 aaKnown RBP12.55□□□□□ -0.4
LMO4-201ENST00000370542 RNASE11Q8TAA1 199 aaKnown RBP12.55□□□□□ -0.4
LMO4-201ENST00000370542 RRNAD1Q96FB5 475 aaKnown RBP12.55□□□□□ -0.4
LMO4-201ENST00000370542 ARV1Q9H2C2 271 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 TXNIPQ9H3M7 391 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 MOB1AQ9H8S9 216 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.55□□□□□ -0.4
LMO4-201ENST00000370542 DUSP13Q9UII6 198 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 FZR1Q9UM11 496 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 FAM96BQ9Y3D0 163 aa12.55□□□□□ -0.4
LMO4-201ENST00000370542 IGLV1-36A0A0B4J1U3 117 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 LOC107986453A0A1B0GWG9 222 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 BTBD17A6NE02 478 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 WNT9BO14905 357 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 CLN5O75503 358 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 IFNA21P01568 189 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 IGHV3-13P01766 116 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 CSN2P05814 226 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 HOXB5P09067 269 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 SPARCP09486 303 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 CCL2P13500 99 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 HOXA5P20719 270 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 CHATP28329 748 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 SNCAP37840 140 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 LPAR6P43657 344 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 ZNF84P51523 738 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 KLF3P57682 345 aaPredicted RBP12.54□□□□□ -0.4
LMO4-201ENST00000370542 RAB4BP61018 213 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms